Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0868 |
Symbol | |
ID | 4203588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1032227 |
End bp | 1033354 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638081751 |
Product | metalloprotease |
Protein accession | YP_695318 |
Protein GI | 110800906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2309] Leucyl aminopeptidase (aminopeptidase T) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0549814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATC AAAGATTAAA TAAGTTAGCT AAACTGCTTG TAAATTATTC AACAGGAGTT AAGGAAGGAG ACTTTGTTTT TGTATCTTGT AATGAGGTTG CAAATCCTTG GCTTACTGAA GTAGTAAAGG AAGCTACTAA GGTAGGAGCT CATGTTGAGT ATATTTTAGA ATCAGAAGAA GCTAAGGAGG CAAGACTTAA ATTTTCTACA AAGGATCAAT TATTATCAGG GAATTTAATG ATGGAAACTA TGCTTGAAAA GGCAGATGTT TGGTTAAGTG CATGGGGAGC TAGAAATACT AGAGCCTTTA GCAATATAGA TTCAGAAAAA ATAAAAGATA GCAGAGCTGG AGAAAAGGGA TGGAGAAAGT TCTATTCAGG AAGAATGGGA GATGGTTCTT TAAGATGGTG TGGAACTCAA TTTCCTACAT ATGCAGATGC ACAGGAAGCT TCAATGAGTT TTAGTGAATA TGAAGATTTT GTTTATGGAG CAGGACTTTT AGACGATGAA GATCCTGTGG CAGAATGGAA TAGAGTAAGC AAAGAACAAG AAAGATGGGT TAAATATTTA GATACTAAAA AAGAACTTCA TATTTTAGCA GAAGGAACTG ATATTAAGGT TTCAGTAGAG GGAAGAAAGT GGATAAATTG TGATGGTAGA GTAAACTTCC CAGATGGTGA AATATTTACA TCACCAGTTG AAAATAAGAT AAATGGACAC ATAACTTTTT CATTCCCAGG GATTTATGCA GGAAAGGAAA TAGAAGGTAT AGAACTTGAA GTTAAAGATG GTAAAGTTGT TTCATATAAA GCTAAAAAAG GAGAAGATTT ATTAAAGGCT TTATTAGAAA CTGATGAAGG AGCAAGCCAT TTTGGAGAAG TAGCTATAGG TACAAACTAT GGAATTAAGA AGTTTACTAG AAATATGCTA TTTGATGAGA AAATAGGAGG AACAGTTCAT ATGGCTATAG GAGATTCTAT GCCAGAGGCT GGTGGTAAAA ATAGATCATC ACTTCATTGG GACATGCTTT GTGACATGAG AAATGGTGGA AGAATATATG CAGATGGAGA ACTTTTCTAT GAAAATGGAG AGTTTAAAAA AGAAATATTA GAAAAATATA ATCTTTAA
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Protein sequence | MADQRLNKLA KLLVNYSTGV KEGDFVFVSC NEVANPWLTE VVKEATKVGA HVEYILESEE AKEARLKFST KDQLLSGNLM METMLEKADV WLSAWGARNT RAFSNIDSEK IKDSRAGEKG WRKFYSGRMG DGSLRWCGTQ FPTYADAQEA SMSFSEYEDF VYGAGLLDDE DPVAEWNRVS KEQERWVKYL DTKKELHILA EGTDIKVSVE GRKWINCDGR VNFPDGEIFT SPVENKINGH ITFSFPGIYA GKEIEGIELE VKDGKVVSYK AKKGEDLLKA LLETDEGASH FGEVAIGTNY GIKKFTRNML FDEKIGGTVH MAIGDSMPEA GGKNRSSLHW DMLCDMRNGG RIYADGELFY ENGEFKKEIL EKYNL
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