Gene CPF_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0837 
Symbol 
ID4201345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp990825 
End bp991835 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content26% 
IMG OID638081721 
Productsensor histidine kinase 
Protein accessionYP_695288 
Protein GI110799475 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0398077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA GGGATTACTT TGAGGAAAAA ATATTCTTTT TAATTGTAAA CTTTATAATT 
TTTGCTACTA TAGCAGTTTT ATTGTTCATA GGCAATGTTG GTTCAGGAAT AATATTCTTA
ATAGGATGCT TTTGGTTTAT TCCTCTTTTT ACATATATAA TTTTAGATTT TTACAAGAGT
AAAAAATTTT ATGATAACAT AAGCATTACT TTAGATAAAT TAGACAGAAA GTACCTATTA
CCTGAGGTAA TAGAAGAACC AAATTTCTAT CATGGTAAAT TTTTATATGA GGTTTTAAAA
GAAACTGATA AAGATATGCA TGAGCATGTT AAAAAATATA TACTTGAGCA AAAAGAATAT
AGAGAATATA TAGAAACATG GGTTCATGAG ATAAAAACTC CAATAGCTTC TACTAGGCTT
ATTTTAGAAA ATAATGAGAG TGAGTCTAGT GAAAATATCA AAAAGGAAAT AAAGAAAATT
GAAGAATACA TAGATCAAGC TTTATATTAT GCTAGAAGTA CAGATGTTAG CAAAGATTAT
ATTGTAAAAG AATTTTCCTT AGGGAAAAGT GTAAGAAATG TAATTAAGAA AAATTCTAGG
GATTTCATAA ATAAGAGAAT AGCTATATAC TTAGAAGATT TAGATTACAA GGTTTATAGT
GATGAAAAAT GGGTTGAATT TATAATAAAT CAAGTTATAA ATAACTCAAT AAAATATAGT
TCCAAAAATA GTAGAGTCAA AATATTTGCA AATAAATCTA AAAACAGCAT AACTCTTAAA
ATAAAAGATA GTGGTGTTGG AATACCTAAT AAAGACTTAG GTAGAGTTTT TGAAAAAGGC
TTTACTGGAG AAAATGGAAG AAGATTTACT AAATCTACAG GCATGGGGTT ATACCTATGC
AAAAATCTTT GTGATAAATT AGGGTTAGGC TTAAAAATAA CTTCAAAAGA GAATGAAGGA
ACAGAAGTTA GCATAATTTT CCCAATAGGA GATGCCATAA TAGCGAATTA A
 
Protein sequence
MKLRDYFEEK IFFLIVNFII FATIAVLLFI GNVGSGIIFL IGCFWFIPLF TYIILDFYKS 
KKFYDNISIT LDKLDRKYLL PEVIEEPNFY HGKFLYEVLK ETDKDMHEHV KKYILEQKEY
REYIETWVHE IKTPIASTRL ILENNESESS ENIKKEIKKI EEYIDQALYY ARSTDVSKDY
IVKEFSLGKS VRNVIKKNSR DFINKRIAIY LEDLDYKVYS DEKWVEFIIN QVINNSIKYS
SKNSRVKIFA NKSKNSITLK IKDSGVGIPN KDLGRVFEKG FTGENGRRFT KSTGMGLYLC
KNLCDKLGLG LKITSKENEG TEVSIIFPIG DAIIAN