Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0837 |
Symbol | |
ID | 4201345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 990825 |
End bp | 991835 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081721 |
Product | sensor histidine kinase |
Protein accession | YP_695288 |
Protein GI | 110799475 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0398077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAA GGGATTACTT TGAGGAAAAA ATATTCTTTT TAATTGTAAA CTTTATAATT TTTGCTACTA TAGCAGTTTT ATTGTTCATA GGCAATGTTG GTTCAGGAAT AATATTCTTA ATAGGATGCT TTTGGTTTAT TCCTCTTTTT ACATATATAA TTTTAGATTT TTACAAGAGT AAAAAATTTT ATGATAACAT AAGCATTACT TTAGATAAAT TAGACAGAAA GTACCTATTA CCTGAGGTAA TAGAAGAACC AAATTTCTAT CATGGTAAAT TTTTATATGA GGTTTTAAAA GAAACTGATA AAGATATGCA TGAGCATGTT AAAAAATATA TACTTGAGCA AAAAGAATAT AGAGAATATA TAGAAACATG GGTTCATGAG ATAAAAACTC CAATAGCTTC TACTAGGCTT ATTTTAGAAA ATAATGAGAG TGAGTCTAGT GAAAATATCA AAAAGGAAAT AAAGAAAATT GAAGAATACA TAGATCAAGC TTTATATTAT GCTAGAAGTA CAGATGTTAG CAAAGATTAT ATTGTAAAAG AATTTTCCTT AGGGAAAAGT GTAAGAAATG TAATTAAGAA AAATTCTAGG GATTTCATAA ATAAGAGAAT AGCTATATAC TTAGAAGATT TAGATTACAA GGTTTATAGT GATGAAAAAT GGGTTGAATT TATAATAAAT CAAGTTATAA ATAACTCAAT AAAATATAGT TCCAAAAATA GTAGAGTCAA AATATTTGCA AATAAATCTA AAAACAGCAT AACTCTTAAA ATAAAAGATA GTGGTGTTGG AATACCTAAT AAAGACTTAG GTAGAGTTTT TGAAAAAGGC TTTACTGGAG AAAATGGAAG AAGATTTACT AAATCTACAG GCATGGGGTT ATACCTATGC AAAAATCTTT GTGATAAATT AGGGTTAGGC TTAAAAATAA CTTCAAAAGA GAATGAAGGA ACAGAAGTTA GCATAATTTT CCCAATAGGA GATGCCATAA TAGCGAATTA A
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Protein sequence | MKLRDYFEEK IFFLIVNFII FATIAVLLFI GNVGSGIIFL IGCFWFIPLF TYIILDFYKS KKFYDNISIT LDKLDRKYLL PEVIEEPNFY HGKFLYEVLK ETDKDMHEHV KKYILEQKEY REYIETWVHE IKTPIASTRL ILENNESESS ENIKKEIKKI EEYIDQALYY ARSTDVSKDY IVKEFSLGKS VRNVIKKNSR DFINKRIAIY LEDLDYKVYS DEKWVEFIIN QVINNSIKYS SKNSRVKIFA NKSKNSITLK IKDSGVGIPN KDLGRVFEKG FTGENGRRFT KSTGMGLYLC KNLCDKLGLG LKITSKENEG TEVSIIFPIG DAIIAN
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