| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0823 |
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| Symbol | |
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| ID | 4202453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 973394 |
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| End bp | 974311 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081707 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_695274 |
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| Protein GI | 110800089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000472378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA TAATGAAAAT GGGTCTTATT CTTAGTGTGT TAATATGTTT AGGATCTTTT
GTAGGATGTA ATTCACTAAA CAAAAAGCAG GTTGAGGCCA CAGAAAATAA AGAAGCTGTA
GAAGCTAAAG ATACAACAGA TGAAAAAAAT ACAGAAGGTA AAGATAAGGC AAAGACAAAT
GAATTAGAGT ATTTACCTTT TGATAAAGAT CCAAATGCTG AGGATGGGAA AGTTGTATCA
GAGTACACTA ATGGTCTTTT AAAGGGGACA TTACAATATC CAGTTAGAAA AGATGGTAAA
AAGATAGCGT ATTTAACTTT TGATGATGGT CCATCAACAA CTAATACACC AGAGGTTTTA
AAGATTTTAG ATAAATATAA TATAAAAGGA ACTTTCTTTG TAACAGGAAA TTCTATAAGT
GCTGGAGATA AATCAAAAGA ATTATTAAAG CAGATTGTTA AAAATGGACA TGCTATAGGA
AATCATACAT ATAGTCACGA TTACAAATAT CTTTATCCTA ATAGAAAGAT GAATGTAAAT
AACATAATGT CAGATATAAA TAAGAATGAA AACTTAATGA AAGAAGTCTT AGGTGAAGAT
TTCTCAACAA AAGTAGTTAG ATTCCCAGGT GGATACTGGT CTTGGCAAGA TAGAACACCT
ATGAAGGAAA AAATGATTCA AGAGGGAATA CAAAACATTG ATTGGAATGC CTTAAATGGA
GATGCAGAAG GGAAAAAGAA AAATGCAGAT GAATTAGTTG AATTTGCTAA GAAAAGTGTA
GAAGGCTTAG GCCCTAATGC AGACAATGTA GTAGTTTTAA TGCATGATAC TTATGGAAAA
GAAGAAACAG TTAAGGCTTT ACCAAGAATA ATAGAGTACT TACAAAGTAA AGGCTTTGAA
TTTAAGAGCA TTAAATAA
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| Protein sequence | MKKIMKMGLI LSVLICLGSF VGCNSLNKKQ VEATENKEAV EAKDTTDEKN TEGKDKAKTN
ELEYLPFDKD PNAEDGKVVS EYTNGLLKGT LQYPVRKDGK KIAYLTFDDG PSTTNTPEVL
KILDKYNIKG TFFVTGNSIS AGDKSKELLK QIVKNGHAIG NHTYSHDYKY LYPNRKMNVN
NIMSDINKNE NLMKEVLGED FSTKVVRFPG GYWSWQDRTP MKEKMIQEGI QNIDWNALNG
DAEGKKKNAD ELVEFAKKSV EGLGPNADNV VVLMHDTYGK EETVKALPRI IEYLQSKGFE
FKSIK
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