Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0818 |
Symbol | |
ID | 4203580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 969127 |
End bp | 970107 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638081702 |
Product | PTS system mannose/fructose/sorbose family IIB subunit |
Protein accession | YP_695269 |
Protein GI | 110800606 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGGAA TTATTCTTGC TAGTCATGGG GAATTTGCTA AAGGCATATT ACAATCTGGC TCAATGATTT TTGGAGAACA GGAAAATGTA AAAGCTGTTA CATTAATGCC GAGTGAAGGA CCTGATGATA TTAGAGCAAA AATGAAAGAA GCAATCGCTT CCTTTGATAA TCAAGATGAG GTTTTATTCT TAGTTGATCT ATGGGGTGGA ACACCATTTA ACCAAGCAGA TAGCCTAGTT GAAGAACATA AAGACAAATG GGCAATCGTA GCTGGTATGA ATTTACCAAT GGTTATTGAA GCTTATGCTT CTCGTTTCTC AATGGAATCA GCACAAGAAA TTGCTGCTAA TATTCTAAAG TCAGCTAGAG AAGGAGTTAA AGTTAAGCCT GAATCATTAG AACCTGAAGA ATCTACTAAA GCTACTACAG ATTCTGCTCA ACAATCTAAC AATGTAGGTG CGCCTGGCTC TTTTGAATAC GTTTTGGCAC GTATTGATTC ACGTTTACTT CATGGTCAAG TAGCAACTGC TTGGACAAAA ACTGTAAAAC CAACAAGAAT TATTGTTGTA TCAGACGATG TAGCTAAAGA TGAACTTCGT AAGAAATTGA TTCAACAAGC AGCTCCTCCT GGAGTTAAAG CGCATACTGT TCCAGTTAGT CAAATGATTA AGCTTGCAAA AGATGATCAA CACTTTGGAG GACAGCGTGC ATTACTTCTT TTTGAAAACC CAGAAGATGT ACTTAGAGCA GTAGAGGGAG GAGTACCTAT AAAGACAGTT AATGTTGGTT CTATGGCTCA CTCTCCAGGT AAGGTTCAAC CAAATAAAGT ACTTGCTTTT AATCAAGAAG ATATTGACAC TTTTAATAAA CTTAAAGAAG CTGGATTAGA TTTTGATGTT CGTAAAGTTC CAAATGATAC AAAAGGAAAT ATGGATGAAA TTCTTAAAAA AGCACAAGAG GAATTAAATA AATTAAAATA A
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Protein sequence | MVGIILASHG EFAKGILQSG SMIFGEQENV KAVTLMPSEG PDDIRAKMKE AIASFDNQDE VLFLVDLWGG TPFNQADSLV EEHKDKWAIV AGMNLPMVIE AYASRFSMES AQEIAANILK SAREGVKVKP ESLEPEESTK ATTDSAQQSN NVGAPGSFEY VLARIDSRLL HGQVATAWTK TVKPTRIIVV SDDVAKDELR KKLIQQAAPP GVKAHTVPVS QMIKLAKDDQ HFGGQRALLL FENPEDVLRA VEGGVPIKTV NVGSMAHSPG KVQPNKVLAF NQEDIDTFNK LKEAGLDFDV RKVPNDTKGN MDEILKKAQE ELNKLK
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