| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0792 |
|---|
| Symbol | |
|---|
| ID | 4201825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 940814 |
|---|
| End bp | 941695 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638081676 |
|---|
| Product | pirin family protein |
|---|
| Protein accession | YP_695243 |
|---|
| Protein GI | 110800393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TCAGAACTAT AGAAAATATA TTTAAAGCGC CAGAACCACA TATGGTTGGA
GATGGATTTA GAGTATCTCA ATATATACCA ACAGGAATAA AAAGTATGGA GCGTTTATCA
CCATTTTTAT TATTAGATTA TAATGCACCA TATTATTTTA AGCCTTCAGA GACTAGATTA
GGTGTTGGAG CTCATCCTCA TCGTGGATTT GAAACAGTAA CAATTGCTTA TGATGGAAAG
GTTGAGCATC ATGATAATAA AGGAAATCAT GGGATTATAG GACCCGGGGA TGTTCAGTGG
ATGACTGCAG CATCAGGTAT TATGCATAAA GAATATCATG AAACTGAATT TAGTAAGAAT
GGTGGTATCT TTCATATGGT TCAACTTTGG GTGAATCTAC CTAAAGATAA AAAAATGATA
GAACCTAAAT ATCAACCTTT ATTAAAAGAA GAAATGGGAG TTTTAAAACT TGATAATGAT
AAAGGAGAAA TAAGTATAAT TGCAGGGGAA GTTAATGGGG TAAAGGGGCC AGCTAATACC
TTTACTAATA TAAATCTTTA TAATATAAAT TTAAAGAATT ATGGTAATAC TACATTAAGT
GAACCAAAAA ATTTTAATAC TGCAATTCTT ATATTAAAAG GTGAAGCTAA AGTAAATGAA
GATAAAATAT GTAAAGAAGG AGATTTTATC GTATTTGAAA ATGTTGAGGG AGAGATTTTA
CTAGAGTCTT TGACTGAAGA GTCACTATTT TTAGTTCTTA GTGGAGAACC AATAAATGAG
CCTGTTGTTT CACATGGACC ATTTGTTATG AATACACTAG GAGAAATACT TGATGCATAT
GAGGATTTTA GAAACAATAA GTTTGGAACA GAGAATTTTT AA
|
|---|
| Protein sequence | MKKFRTIENI FKAPEPHMVG DGFRVSQYIP TGIKSMERLS PFLLLDYNAP YYFKPSETRL
GVGAHPHRGF ETVTIAYDGK VEHHDNKGNH GIIGPGDVQW MTAASGIMHK EYHETEFSKN
GGIFHMVQLW VNLPKDKKMI EPKYQPLLKE EMGVLKLDND KGEISIIAGE VNGVKGPANT
FTNINLYNIN LKNYGNTTLS EPKNFNTAIL ILKGEAKVNE DKICKEGDFI VFENVEGEIL
LESLTEESLF LVLSGEPINE PVVSHGPFVM NTLGEILDAY EDFRNNKFGT ENF
|
|---|
| |