| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0764 |
|---|
| Symbol | |
|---|
| ID | 4202320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 905799 |
|---|
| End bp | 907163 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638081648 |
|---|
| Product | sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein |
|---|
| Protein accession | YP_695215 |
|---|
| Protein GI | 110798681 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00819234 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATACAT TAATAAATAA AAAAGTAGAA AAAAGTGATG ATGTTTCTAT AAAAACTTTA
ATTACTTATA GTATGGGAAG TTTAGGAAAC AATATGATAT ACGCATTGAT TAGTTCCTAC
CTTTTAATCT TTTTAACAGA TAGTTTTAAA GTAGGGGCAG CTGCCATAGG AACCTTATTT
TTGGTGGCAA GAATTATAGA TGCAATAACA GACCCTATAA TGGGGGTTAT AGTTGATAAT
ACTAATACTA AAATCGGAAA GAGTAGACCC TATTTATTTA TCGTTCCTAT TTTCATGGGA
ATAGCAACAA TCATGTGTTT TTCAGCACCA GATTTAAGTT ATAGTGGAAA AATAATATGG
ATATACATAG CGTATATTTT CTGGGGAATA TCCTTTACTG CAATGGATAT ACCATATTGG
TCATTATCTG CCAATATTAC AAGATCTTCG TCAGGAAAAA CTAAGATTGT TACATCAGCA
AGAACAGTAG CCTATGTAGG TAATTTTATA ATTTTAACTT CAACAATTCC GCTTGTATCA
ATAATTGGAA ACTGGCAAAC TGTGGCCATA ATATATGTTT GCTTTGCTAC TATATTTACT
TGGGTTACAG CCTTTGGAAT TAGAGAAATT AAGGATAATG TGGCAAAGAA AAAGGAAAAG
CAAGGGTTTA AACAATTTAT AAATCTATTA AAGACAAATA AGCCTTTAAG AATAGTTTTA
TTATCAATGT TAGTTTTAGA ATTAAGTGGA TCAATAAAAA ATACAATATC TATATATTAT
GTAAAGTATA ATTTTAATGC GGAAATGATG ATTCCAGTAG TTAGTTCAGT TGGTATGGGA
GCTAGTATAT TAGGTGGAAT AATGTCACCA TTTTTAACAA AAAAATTAGG AAAAAGAAAT
ACAGCTCTTT TAGGATTATT AGCTGGTGCA GCTGGATCAT TTTTAGTATT TTTATTATCC
TATTCTTCAT TACCTTTAAT GATAGTTATA AACTTCATAA GTGGAATTTT TGATGGAGCA
GGTTATATTA CCTTAACATC AATGGTTGCA GATTGTGTTG AGTATGGTGA ATGGAAAACT
GGAAAGAGAT CAGAAGGAAT GATCTTCTCT TTAAATATAT TTAAAAGTAA GATTGCCAGT
GCTATTGGGG GATCCTTATG TGGATATATC TTAGCGTATA TTGGTTATAC AGCAAATGAA
AGTCAATCTA CTTTTACATT AAACGGAATT CATTTAATAC AGACTTTAGT TCCATGTGCC
ATTGTAATAA TAAGCTTTAT GCTACTAAGA AGATATAATT TATCTGAGGC AGAATATGAA
GCTATAGTTG ATGATTTAAA AAATGGTGTT ACAAGAATAG GTTAA
|
|---|
| Protein sequence | MDTLINKKVE KSDDVSIKTL ITYSMGSLGN NMIYALISSY LLIFLTDSFK VGAAAIGTLF
LVARIIDAIT DPIMGVIVDN TNTKIGKSRP YLFIVPIFMG IATIMCFSAP DLSYSGKIIW
IYIAYIFWGI SFTAMDIPYW SLSANITRSS SGKTKIVTSA RTVAYVGNFI ILTSTIPLVS
IIGNWQTVAI IYVCFATIFT WVTAFGIREI KDNVAKKKEK QGFKQFINLL KTNKPLRIVL
LSMLVLELSG SIKNTISIYY VKYNFNAEMM IPVVSSVGMG ASILGGIMSP FLTKKLGKRN
TALLGLLAGA AGSFLVFLLS YSSLPLMIVI NFISGIFDGA GYITLTSMVA DCVEYGEWKT
GKRSEGMIFS LNIFKSKIAS AIGGSLCGYI LAYIGYTANE SQSTFTLNGI HLIQTLVPCA
IVIISFMLLR RYNLSEAEYE AIVDDLKNGV TRIG
|
|---|
| |