Gene CPF_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0739 
Symbol 
ID4202678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp876727 
End bp877938 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content27% 
IMG OID638081623 
Productputative cytochrome C-type biogenesis protein 
Protein accessionYP_695190 
Protein GI110799581 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein
[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0112308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAATA TTAATTTCTT TATTGTTTTT ATAGAGGGAA TCTTATCAAT TTTCTCGCCG 
TGTATATTAC CAATACTACC TATATACTTA AGTATGTTAT CTAATAGTAG TGTAGAGGAT
ATAAGGGATT CTAATTTTAA AAGTGGTGTT TTAATAAGAA ACACATTATT CTTTACTTTA
GGAATATCAA CTACATTTTT TATATTAGGT TCATCAATAA GTGCTTTAAG CTCATTCTTT
AATACTAATA AGAATATTAT AATGATTTTA GGTGGAGTTA TTATATTATT TATGGGCTTA
TTTTATTTAG GTGTAATAAA TTTAAATATA TTAAATAGAG AAAAAAGATT GAATTTTAAA
TATAAAAATA TGTCACCGTT ATCAGCCTTT GTGTTAGGAT TTACATTTAG TTTTGGATGG
ACACCATGTA TAGGGCCTAT ATTAGCATCA GTACTTGTAA TGGCATCAAG TTCAAAAAAT
TTATTAATGT CTAACTTATT AATACTAGTT TATACAATTG GTTTTATATT ACCATTTATA
ATAGCATCAT TATTCTATGG TAAATTATTT AAAAAGTTCG ATGGAATAAA GAAACATATG
GACTTAATTA AGAAGATAAG TGGAATTTTT ATCATAATAG CTGGTTTAAT AATGCTTGTA
GGTGGAATAA GAAATATGAA TAATGAGATA AAGATTAATA ATAACCCTCA GATAAATAAG
AGCGAAAGTG CAAATAAAGA TAGTAAAAAT GAAAGTGACA ATAAGAAGCA AGAAGAGGGA
AATAAAATTC CTCCAATAGA TTTTACTTTA TATGATCAGT ATGGGAATAA ACATACTCTT
AGTGAATATA AAGGAAAAAC TATATTCTTA AATTTCTGGG CAACTTGGTG CCCTCCATGT
AGAGGAGAAA TGCCTTATAT AGATGAGCTT TACAAAGAAT ACAATGAAAA TAAAGATGAT
GTTGTAATTC TTGGAGTAGC TTCACCTAAT TTAGGAAGAG AAGGTTCAGA GGAACATATA
AAGAATTTCT TGAAAGAAGA AAATCATGTT TTCCCAGTTG TACTTGATGA AAATGGAGCT
ATGGTTTATC AATATGGAAT AAATGCTTTC CCATCAACTT TCATTATAAA TAAGGAAGGA
TATATAACTA AATATATTCC AGGTGCAATG ACAAAGGAAA CCATGAAAAC TTTAATTGAA
AGTGAAAGAT AA
 
Protein sequence
MENINFFIVF IEGILSIFSP CILPILPIYL SMLSNSSVED IRDSNFKSGV LIRNTLFFTL 
GISTTFFILG SSISALSSFF NTNKNIIMIL GGVIILFMGL FYLGVINLNI LNREKRLNFK
YKNMSPLSAF VLGFTFSFGW TPCIGPILAS VLVMASSSKN LLMSNLLILV YTIGFILPFI
IASLFYGKLF KKFDGIKKHM DLIKKISGIF IIIAGLIMLV GGIRNMNNEI KINNNPQINK
SESANKDSKN ESDNKKQEEG NKIPPIDFTL YDQYGNKHTL SEYKGKTIFL NFWATWCPPC
RGEMPYIDEL YKEYNENKDD VVILGVASPN LGREGSEEHI KNFLKEENHV FPVVLDENGA
MVYQYGINAF PSTFIINKEG YITKYIPGAM TKETMKTLIE SER