Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0726 |
Symbol | |
ID | 4203368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 862480 |
End bp | 863163 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081611 |
Product | hypothetical protein |
Protein accession | YP_695178 |
Protein GI | 110800513 |
COG category | [R] General function prediction only |
COG ID | [COG2102] Predicted ATPases of PP-loop superfamily |
TIGRFAM ID | [TIGR00290] MJ0570-related uncharacterized domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT GGAGTAATGG TGCAAAAGGT AAAAAATTTA TAGCATCATA TAGTGGTGGT AAAGATAGTA CTTTAGCTTT ATATAAAGCT ATGCAAGAAG GAAAAGCTAT AGGGATAATT GTAATGATGG AGGAAGATGG AGAGAGATCA AGAGCACATA GTCTATTTCC ATCTGTATTG AAAGCACAAG CAGAGGCTAT TGGATTACCT TTGTTTACAG CAGTTACAAA TTGGGATGAC TATGAAAAAG TTTTTGTGAA GAAATTAAAA GAAGCAAAAG ATTTAGGGGC AGAAGTGCTT GTTACAGGGG ATATTGATGT TCCAGAAGAG GAATGTTGGC ATGAAAGGGT TACTAATAGT ATTGGACTTG GACTAGGTAT GCCACTTTGG AGAAAGAATC ATAAAGAAGT AGTGGAAGAG TTTGTAAATT TAGGCTTTGT AACAAAAATT GTTACTGTTA ACCTAAATAA AGGAATGAAA AAAGAAGACC TTGGAAGGAT TCTTACCTTT GATTATATTA AAGAGTTAGA AGAAAGAGGA ATTGATCCTT GTGGTGAAGC AGGTGAATTT CATTCAACAG TTATAGGTGG TCCACTTTTT AAAAAAGAAT TAAGAGTTAA ACATGGAGAA ATTATATCAG AGGGAAACTA TATGTATTTA ACTTTAGAGT TAGAGAACCT TTAG
|
Protein sequence | MKKWSNGAKG KKFIASYSGG KDSTLALYKA MQEGKAIGII VMMEEDGERS RAHSLFPSVL KAQAEAIGLP LFTAVTNWDD YEKVFVKKLK EAKDLGAEVL VTGDIDVPEE ECWHERVTNS IGLGLGMPLW RKNHKEVVEE FVNLGFVTKI VTVNLNKGMK KEDLGRILTF DYIKELEERG IDPCGEAGEF HSTVIGGPLF KKELRVKHGE IISEGNYMYL TLELENL
|
| |