Gene CPF_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0617 
SymbolpstS 
ID4202662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp745323 
End bp746153 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content33% 
IMG OID638081502 
Productphosphate ABC transporter, phosphate-binding protein 
Protein accessionYP_695070 
Protein GI110799796 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.774542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AGAGATTAAT AGCAATTATA GGTACTATAT TTATAGGTGC AACAGCCATG 
GTTGGATGTA ATTCTGGAGG AAGCGAAGCA AAATCTACAA ATTCAGTTAG TATATCTGGA
TCAACTTCTG TGGGGCCAGT TATGGAAGCA GAGGCGGAGG CTTTTAAGAC TAAGAAACCA
GATGTATCTA TAGAAATAAA TCAAATAGGA TCATCAGCAG GTATTAAAAA TGCTATGGAG
GGAGTTTCAG AAATAGGAAT GGCTTCCCGT GACCTTAAGG GAGAAGAAAA ACAAGCAGGA
CTTAAAGAAG TAGAAATAGC TTATGATGGA ATAGCTTTAA TAACACATAA AAATAATCCA
GTGAAGGATT TAACATTAGT TCAAATAAAA GACATATATA CAGGAAAAAT AACAAATTGG
AAAGAACTTG GAGGGAATGA TGCTCCAATA GTGGTTGTTT CTAGAGAGGA TGGATCTGGA
ACAAGAGATG CTTTCCAAGA AATAGTAGGA TTTAAGGCTG AAGAGTTAAC TGTTAATTCT
CAGATATCAG ATGGATCAGG AAATATCAAG TCCTTAGTTC AAGGTAATGA AAATGCAATA
GGATATATAT CTTTTAGTTA TGTTGATGAT AGTGTAAGTG CAGTAAAGGT TGATGGAGTT
GAAGCAACAC CGGAAAATGT TTTAAATAAA TCTTACAAAG TTTCAAGACC TTTCTTAGCA
GTATATAAGG AAGAAAATTT AACAGAATCA GGTAAGAGTT TTATAGATTT CATATTAAGT
GAAGAAGGGC AAGACATAGT AGCTAAAGAA CACTTAATAA AAGTAAAATA G
 
Protein sequence
MFKKRLIAII GTIFIGATAM VGCNSGGSEA KSTNSVSISG STSVGPVMEA EAEAFKTKKP 
DVSIEINQIG SSAGIKNAME GVSEIGMASR DLKGEEKQAG LKEVEIAYDG IALITHKNNP
VKDLTLVQIK DIYTGKITNW KELGGNDAPI VVVSREDGSG TRDAFQEIVG FKAEELTVNS
QISDGSGNIK SLVQGNENAI GYISFSYVDD SVSAVKVDGV EATPENVLNK SYKVSRPFLA
VYKEENLTES GKSFIDFILS EEGQDIVAKE HLIKVK