| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0611 |
|---|
| Symbol | |
|---|
| ID | 4202314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 737229 |
|---|
| End bp | 738521 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638081496 |
|---|
| Product | cell wall binding repeat-containing protein |
|---|
| Protein accession | YP_695064 |
|---|
| Protein GI | 110798675 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA GGAGAATTAT TACAACCCTT ATACTAACGC TTACTTTATC CTTGCAAAGC
ATATCAGTTT TTGCTCAGCC AACTAAAGAA GTATCTAACA TTTCTTCAGA AAAGACTGAT
ATAAATAATG GCTGGGTTCA TGAAAATAAT AATTGGTATT ATATATTAAA CAATGAAAAA
ATAACCGGTT GGAAAGAGAT TGATGATAAT TGGTATCATT TCAATAGTGA AGGAATCATG
GAAACTGGTT GGCAATTTAT AAATGGTGAT TGGTATTATT TAAAATCTAA TGGTCCTATG
GCTACTGGTT GGCAATTTAT AAATGATGAT TGGTACTATT TAAAACCTAA CGGTCCTATG
GCTACTGGTT GGCAATCTAT AAATGATGAT TGGTACTATT TAAAACCTAA TGGACCTATG
GTTACTGGTT GGCAATTTAT AAATAATGAC TGGTATTATC TAAAGTCTAA TGGGCCTATG
GCTACTTCAT GGCAAAAGAT AAATGATGAT TGGTATTACT TAAAACCTAA TGGGCCTATG
GCTACTGGTT GGCAAAAGAT AGATAACAAT TGGTACTATT TAAATTCTAA TGGGCCTATG
GCTACTGGCT GGAGATTCTT AGATAACAAT TGGTACCACT TAAGTGAAAA TGGACCTATG
ACTATAGGTT GGAAAATTTC AGATGATAAA TGGTATTATC TTGATGATAA TGGTGCAATG
GCTCAAGATT CTGAAAAAAC AATTAATGGA AACATATATA AATTTGATTC AGATGGGGTA
ATGATAACTG ATAAATGGTT TGAGTCTACT TATGTAAATA AAGATGGAAT TGTATTGCAC
GGTTCTCCAT CTAGATCTCA TTCATATACT CAATACAAGT TATTTAATTA TATGAGTAAT
GAAGATAATA GGGAATCTGT TCATTATGCG GCTATAGACC TTCACGGTGG AGAAACAACT
AATAACTGTG TTTATTTCAC TTCTGAAGCC TTAAGAAGAG CTGGAGTTAA AATCCCTCTA
TATGTAGCTA ACACATATCA ATTAGAAAGA GAATTACTTT CTAGAGGATG GATAAGATCA
ACTAACACAA GTGATCTTAG ACCTGGAGAT GTAGTATTTT CAGGATATAA ACATTCATTT
ACATTTATGA ATTGGTATGA TGATGATTAT GCTTATATAG TTGATAATCA AAAAAAATAT
TTTGATTCTG TTCTTCATAG AAGACTAGTC TCAGTAGATG ACCCTGTTAA CGGTACTATA
AGAGCAACTC ATTTCTTCTA TTTACCAGAA TAA
|
|---|
| Protein sequence | MKRRRIITTL ILTLTLSLQS ISVFAQPTKE VSNISSEKTD INNGWVHENN NWYYILNNEK
ITGWKEIDDN WYHFNSEGIM ETGWQFINGD WYYLKSNGPM ATGWQFINDD WYYLKPNGPM
ATGWQSINDD WYYLKPNGPM VTGWQFINND WYYLKSNGPM ATSWQKINDD WYYLKPNGPM
ATGWQKIDNN WYYLNSNGPM ATGWRFLDNN WYHLSENGPM TIGWKISDDK WYYLDDNGAM
AQDSEKTING NIYKFDSDGV MITDKWFEST YVNKDGIVLH GSPSRSHSYT QYKLFNYMSN
EDNRESVHYA AIDLHGGETT NNCVYFTSEA LRRAGVKIPL YVANTYQLER ELLSRGWIRS
TNTSDLRPGD VVFSGYKHSF TFMNWYDDDY AYIVDNQKKY FDSVLHRRLV SVDDPVNGTI
RATHFFYLPE
|
|---|
| |