Gene CPF_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0595 
Symbol 
ID4201079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp717912 
End bp718574 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content28% 
IMG OID638081480 
Productsugar transferase family protein 
Protein accessionYP_695048 
Protein GI110800809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.750917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA TAAATGATAT TCCAATTAAA TCAGAGTGTA GTAAGGAAAA AAGCTATCTA 
TTTTATAATG TTGCAAAAAG ATGTTTTGAC TTAATATGTT CGTTAATTGC GTTAATATTA 
TTTTCACCAA TATTTTTGAT TTTATATATA TGGGTGAAGG TTGATTCTAA AGGACCAGCA 
TTTTTTGGGC ATAAAAGAAT TGGTAAAGAC AGAAAATATA TAGATGTTTA TAAATTTAGA 
TCTATGGTTT CTAATGCAAA AGAGGTGTTT GATAATTTTA CACCAGAGCA AAAAGCTGAA 
TTTGAAAAGA ATTTCAAGTT AGATGATGAT CCAAGAATAA CTAAATGTGG AGCTTTTTTA 
AGAAAGACAA GTTTAGATGA ATTACCTCAA TTAATAAATA TTATTAAAGG AGATATGAGC 
ATTGTTGGAC CAAGACCAAT AGTAGATAAA GAAGTTGAAA AGTATGGTGA ATATGCAGAC 
AAGCTTTTCA GTGTTACACC AGGATTAACT GGTTATTGGC AAGCAAATGG AAGAAGTGAC 
ACAACATATG AAGAAAGAGT ACAAATGGAT ATGTACTATA TAGATAATAG ATCTTTATGG 
CTTGATATTA AAATAATATT TAAGACGGTT ATATCAGTTA TAAAAAAAGA AGGAGCTGTA 
TAG
 
Protein sequence
MQNINDIPIK SECSKEKSYL FYNVAKRCFD LICSLIALIL FSPIFLILYI WVKVDSKGPA 
FFGHKRIGKD RKYIDVYKFR SMVSNAKEVF DNFTPEQKAE FEKNFKLDDD PRITKCGAFL 
RKTSLDELPQ LINIIKGDMS IVGPRPIVDK EVEKYGEYAD KLFSVTPGLT GYWQANGRSD 
TTYEERVQMD MYYIDNRSLW LDIKIIFKTV ISVIKKEGAV