Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0594 |
Symbol | |
ID | 4202630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 717071 |
End bp | 717871 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081479 |
Product | HAD family hydrolase |
Protein accession | YP_695047 |
Protein GI | 110799300 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAT TAGTAGCTAT AGATATGGAT GGAACTTTAT TGAAAGAAGA TAAAACTGTA TCTGAAAAAA CTAAGGAAGC AATAAAGAAA GCTAGAGAAA AAAATGTAAA AGTAGTTTTA GCAACAGGAA GACCAGTAGA TGGAGTAAAA AGATATTTAG AAGAATTAGA TTTATGTCAT GATGATGAGT ATGTTTTAAC TTTTAATGGA GCTATAGTTA AGGAAGTTGG ACCTGATAGA GTAATTTGTA GAGATACTTT AAAAGGTAGC GATTTAAAAT ATTTATATGA AATAAGCAAA AATGTTGGAG TTAATATACA TGCTTTTTCT AATTTTGGCT GTGTAACTCC TAAGATGAAT AAATATACAG AATTAGAAGG TAGAATAAAC GGAATAGAAG TTTGTGAAGC TGATTATAAT GACATAAAAG AAGATGAAGA AATAATAAAG ATAATGATGA TTGATGAACC AGAAGTTCTA GAAGAAGGAA TTAAGAAGTT ACCAGAAGAA GTATATGAAA AATATACTGT AGTAAGAAGT GCTCCTTATT TCTTAGAGTT TTTAAGTAAG ACTTGTAATA AAGGAGAAGG GGTTAAATCT CTAGCTGAAA GCTTAGGTAT AAAAAGAGAA GAAGTTATAG CAATTGGAGA CGCTGGAAAT GATCTTCATA TGATAGAGTA TGCAGGCCTT GGAGTTGCTA TGGGAAATGC TTTTGAAGAA GTAAAAGAAA AAGCTGACTT TATTACAAAA AGTAATGAGG AAGATGGCGT AGCTTTTGTT TTTGAAAAAT TTGTTTTATA G
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Protein sequence | MYKLVAIDMD GTLLKEDKTV SEKTKEAIKK AREKNVKVVL ATGRPVDGVK RYLEELDLCH DDEYVLTFNG AIVKEVGPDR VICRDTLKGS DLKYLYEISK NVGVNIHAFS NFGCVTPKMN KYTELEGRIN GIEVCEADYN DIKEDEEIIK IMMIDEPEVL EEGIKKLPEE VYEKYTVVRS APYFLEFLSK TCNKGEGVKS LAESLGIKRE EVIAIGDAGN DLHMIEYAGL GVAMGNAFEE VKEKADFITK SNEEDGVAFV FEKFVL
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