| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0576 |
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| Symbol | lysA |
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| ID | 4202038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 690485 |
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| End bp | 691780 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081461 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_695029 |
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| Protein GI | 110800409 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.757685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT TTGGATCAAT GAAAGTAGAA GAAAATGAGT TATATGTTGG AGGAGTAAAA
GCAAGTGCTT TAAGCAAGGA ATATGGAACT CCTTTATATG TTATTGATGA AGAGTTAGTG
AGAAGCAATT GTAGAAGATA CTATAATGCT ATGAAGTGTG AAGAAAGAGG AAACAGAGTT
ACCTATGCAG GAAAGGCATT TATAAATATG TCCATGTGCA ATTTAGTTAA TGAAGAAAAT
TTATATTTAG ATGTTGTTTC AGGTGGAGAG CTTTATACTG CTTATAAAGC AGGTTTCCCA
TTAGAAAGAA TATATTTCCA TGGTAACAAT AAATCTGATT ATGAAATAGA TTTAGGAGTA
AGATTAGGAA TTGGAAGATT TATAGTTGAT AATATTCATG AACTAGAAGT TCTTAATTCT
ATAGCTCAAG AATATGGAAG AGTTCAAAAA GTTTATTTGA GAATAACTCC TGGAGTAGAG
GCCCATACCC ATGAATATAT AAAAACAGGT CAATTGGACT CAAAATTTGG ATTCCCTGTA
ATTGGTGATA CAGTTTATGA CGCTATTAAA AGAGCAATGG AATTAGAGTA TATAGAACTT
AATGGATTGC ATTGTCATAT AGGTTCGCAA ATATTTGACT TAGAACCTTT TGAAGATACA
ACAGAAATTA TGCTAAATCT TATAAATGAT ATAAAAGAAA CCTTAGGATA TGAAATAAAA
GAATTAGACT TAGGTGGAGG ATTTGGTATA TATTACACTG AAGGAGATAA GCCAAAAGAA
ATAGAAGAAT ATTGTTCAGT TATAATAAAT AAAGCTGATG AAATATGCAG AAAGTTAAAT
ATGAATGTTC CTATATTAAG TATAGAGCCA GGAAGAAGTA TTGTAGGGAA TGCAGGATTA
ACTCTTTATA CTGTAGGAGC TATAAAAGAA ATTCCTAATA TAAGAAAATA TGTAAGTGTA
GATGGTGGAA TGAGTGATAA TATAAGACCA GCCTTATACA GTGCAAATTA TGAATCATTA
ATAGCTAACA GAGTTTTTGA TAATTCTAAG GAGATAGTTA CTGTAGCGGG AAAATGCTGT
GAATCAGGGG ATGTACTTTT AAATTCCATA GAGATGCCTA GAATGGAAAC TGGAGATATA
TTAGCTATAA TGTCTACAGG AGCATATGGA CATTCAATGG CTAATAATTA TAATAGAATT
CCTAAGGCGG CAGTTGTAAG TGTAAGTAAT GGAATTTCAA AAGTTATGTG TAAAAGAGAA
ACTTATGAAG ATTTGCTTAG AAATGAATGT TTTTAA
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| Protein sequence | MKLFGSMKVE ENELYVGGVK ASALSKEYGT PLYVIDEELV RSNCRRYYNA MKCEERGNRV
TYAGKAFINM SMCNLVNEEN LYLDVVSGGE LYTAYKAGFP LERIYFHGNN KSDYEIDLGV
RLGIGRFIVD NIHELEVLNS IAQEYGRVQK VYLRITPGVE AHTHEYIKTG QLDSKFGFPV
IGDTVYDAIK RAMELEYIEL NGLHCHIGSQ IFDLEPFEDT TEIMLNLIND IKETLGYEIK
ELDLGGGFGI YYTEGDKPKE IEEYCSVIIN KADEICRKLN MNVPILSIEP GRSIVGNAGL
TLYTVGAIKE IPNIRKYVSV DGGMSDNIRP ALYSANYESL IANRVFDNSK EIVTVAGKCC
ESGDVLLNSI EMPRMETGDI LAIMSTGAYG HSMANNYNRI PKAAVVSVSN GISKVMCKRE
TYEDLLRNEC F
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