| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0550 |
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| Symbol | |
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| ID | 4202039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 655789 |
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| End bp | 656781 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081432 |
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| Product | cell wall binding repeat-containing protein |
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| Protein accession | YP_695004 |
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| Protein GI | 110800410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.515915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA ATCACAAAAT AACATCGATT GTATTAACAC TTGGACTAAT ATCTTCAAGC
ATATATACAA TCAATGTAAA TGCAGAAACA CTTAATTCGA AAATCCAAGT ATCAAACTTA
AATTTATCTA ACTCATATAA CATAAAAAAT GAAAATTTAA TTAAATCTTC TAAAGAAGGT
TGGATTAATA CAAATGGAAT ATGGTACTTC TATAAAAATG GAATTATACA AACTGGTTGG
CTAAATGATA ATGGTATTTG GTACTATTTA AATGAAAATG GCTCTATGGC TACAGGTTGG
TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAACG GAGTTATGCA AACTGGCTGG
CTAAATGATA ATGGCAATTG GTACTATTTA AATGACAATG GTTCTATGGC TACAGGTTGG
TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAGCG GAGTTATGCA AACTGGCTGG
CTAAATGATA ATGGCAATTG GTACTATTTA AACGACAATG GTTCTATGGC TACATGTTGG
TATAAAGTTG ATTCTAACTG GTATTATTCA AATTCTAATG GAGTTATGCA AACTGGTTGG
TTAAATGACA ATGGTACTTG GTACTATTTA AACGACAATG GCTCTATGGC TACAGGTTGG
TATAAAGTCT ATTCTAAATG GTATTATTCA AATTCTAACG GAGTTATGCA AACTGGCTGG
CTAAATGACA ATGGTACTTG GTACTATTTA AATAGTTCTG GTGAGATGGT TACTAACACA
ATTATTGATG GTTGGAAAAT AGATTCTAAC GGTATAGCAA CGCCATTAAA AGATGAAAAC
CATTCTATTG TATATGTAAC TCCAAACGGT AAAAGCTATC ACTATAGCAA AGATTGTACA
GCCTTAAAAA GAAGCTCTTC TATCCTTAGC ATGAGCCTTA ATGAAGCTAT AAATAAAGGA
AAATCTGATC CTTGTAACTT GTGTGTTAAA TAA
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| Protein sequence | MKINHKITSI VLTLGLISSS IYTINVNAET LNSKIQVSNL NLSNSYNIKN ENLIKSSKEG
WINTNGIWYF YKNGIIQTGW LNDNGIWYYL NENGSMATGW YKVDSNWYYS NSNGVMQTGW
LNDNGNWYYL NDNGSMATGW YKVDSNWYYS NSSGVMQTGW LNDNGNWYYL NDNGSMATCW
YKVDSNWYYS NSNGVMQTGW LNDNGTWYYL NDNGSMATGW YKVYSKWYYS NSNGVMQTGW
LNDNGTWYYL NSSGEMVTNT IIDGWKIDSN GIATPLKDEN HSIVYVTPNG KSYHYSKDCT
ALKRSSSILS MSLNEAINKG KSDPCNLCVK
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