| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0544 |
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| Symbol | spoVD |
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| ID | 4202522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 648176 |
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| End bp | 650341 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638081426 |
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| Product | stage V sporulation protein D |
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| Protein accession | YP_694998 |
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| Protein GI | 110800679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.6503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATAA TAAGAAAAAG ACTTTCGTTT ATCCTAGCAT TTATTATAAT TATGTGTTTT
ATACTAAGCA TTAGATTATC TTATGTAATG ATAGTTAAAG GACCTGAATA TGCAGAACTA
GCTGTTGAAC AATGGACAAA CGAAGTTAAA ATATCTGCAA GAAGAGGAAA AATACTAGAT
AGGGATCTAA ACGAGCTTGC TGTTAGTTCT AATGTTTATA GAGTTGACTT CAACCTAAAT
GCAATTAGAT CTTATACAAA GAAAACTGGA AAAACTAATG AAGAATTAGC TTTAGAAATT
TCTAAGGTTC TTGAAATGGA TAAGGATACA GTTTTAAAAA AATTAGAATT TAAACTTCCT
TCTGGAGCTC CTGCTGGTGC TGCAATCCTT GCTAGAAGAA TAGAAAAGGA GAAAGCTGAT
AAAGTTAAAG AATTAGAAAT ACCAGGAGTA ATGGTTTCTC CAGATACTCA AAGATACTAT
CCTAATGATA ATTTTCTTTC TCATGTACTA GGTACTACTA ACTCTGACGG TGTTGGACTA
AATGGTATTG AGCTAAAATA TGATAGAGTT TTATCTGGAA GTCCTGGATT AAAAATAACT
GAGATGGTTA AAGACGGTGC TGAATATCCT TATACTATTT CTAGATTTAC AGCCCCTGTA
GATGGCAAAG ATGTAGTCTT AACAATTGAT GAAAAATTAC AATACTTTGC TGAACAAATC
GCTGAAATAG GTTTAGTACA TCATAATGCT GATGCAGCAT CAGTAATAAT AATGAATCCA
AACAATGGTG AAATCTTAGC TATGTCTAAC AAACCAGACT TTAATCCAAA TAAACCTTAT
GATGGGGCTG AAAATTTTTC TGGAAATACT TCCTCAGATA GAATTCAAAA AATGTGGAGA
AATAGATCTG TTTCAGACTC CTTCGAACCT GGTTCTATTT TTAAGATAAT AACAGCTTCC
GCCGCAGTCC AAGAAGGGGT AGCTGGTAAG GATGAAACCT ATACCTGTAG TGGTGGTCTT
CAAAAAGGTG ATAGATTCAT TAAATGCTGG AAAAGAGGTG GCCATGGCAC TCAAACCTTT
GAAGAAATAA TACAAAATTC ATGTAACGTT GGATTTATGA ATTTAGGAGA AAAATTAGGT
GCTGAAAAAT TAAATGAATA TATTAAAAAA TTTGGTCTTG GAAAAAAATC CGGTGTAGAT
TTACCTGGTG AATCTCCTGG AATAGTTAAG AAAACAGAAA ATATAACAGA TATGGACTTA
GCAACTATTT CTTTTGGTCA AACTAATACT GTTAACCCAA TTCAATTCAT GACTGCAGTT
AATGCCGTTG CCAATGGTGG CACATTAATT CAACCCCATG TTGTTAAAGA AATAAGTTAT
ATAGATGAAA ATAATGATAG AGTTATAGAT GAAACCTTTG TCCCTAAAAA AACAGAAAAT
TTAATAAGCA AAGAAACTGC TGATCAAATA AAATTAGCCC TAGAAAACGC AGTAAAAAAT
GGATCAGCAA AAGGAGCTTA TAAAGAAGGA TATGGAGTTG CTGGTAAAAC AGGTACTGCC
CAAAAAGTTA ATCCTGAAAC TGGTGGATAT GGTGGAGGAT ATGTAGCTTC CTTTGTTGGT
TTTGCTCCTT ATGATAATCC ACAAATATCT GTTATGGTAT CTGTTGATAA TCCTAAAAAT
GGAGAATATT ATGGTGGTAG AGTTGCAGCA CCTTTAGCTG GAATGCTACT CCAAAATATA
TTTAACTATA TAGATTTAAC AGAATTCCAC TTAGATGAAA AACTTCCTGA AAAAGAAACT
GTTATAATTC CTGAAGTTCG TGGATTACCT ATAAATGATG CTACAAGTAT GCTAAAAGAA
TTAAGTATAT CTTACGAAAT AGAAGGTGAA GGTGAATTTA TAGTTGAAAG TAATCCTGCT
CCTGGCTATC CAATATCTCC TGATACAAAA ATAACTTTAA TAGCTGGTGA TAGTTCAAAC
TTAAATAGTG ATGTTATAAT TCCAGACTTT AAAAACTATT CTAAAGAATC TGCTGAAAAA
CTTCTTAATC AGTTAGGTCT TATAGGAGAA TTTGTTGGTG AAGGACCATC TGTAACTAAG
CAAAGTATTT CACCTGATGA AGTTGTAAAT GGAAATTCAA AAATTACATT AACCTTAGGA
TATTAA
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| Protein sequence | MAIIRKRLSF ILAFIIIMCF ILSIRLSYVM IVKGPEYAEL AVEQWTNEVK ISARRGKILD
RDLNELAVSS NVYRVDFNLN AIRSYTKKTG KTNEELALEI SKVLEMDKDT VLKKLEFKLP
SGAPAGAAIL ARRIEKEKAD KVKELEIPGV MVSPDTQRYY PNDNFLSHVL GTTNSDGVGL
NGIELKYDRV LSGSPGLKIT EMVKDGAEYP YTISRFTAPV DGKDVVLTID EKLQYFAEQI
AEIGLVHHNA DAASVIIMNP NNGEILAMSN KPDFNPNKPY DGAENFSGNT SSDRIQKMWR
NRSVSDSFEP GSIFKIITAS AAVQEGVAGK DETYTCSGGL QKGDRFIKCW KRGGHGTQTF
EEIIQNSCNV GFMNLGEKLG AEKLNEYIKK FGLGKKSGVD LPGESPGIVK KTENITDMDL
ATISFGQTNT VNPIQFMTAV NAVANGGTLI QPHVVKEISY IDENNDRVID ETFVPKKTEN
LISKETADQI KLALENAVKN GSAKGAYKEG YGVAGKTGTA QKVNPETGGY GGGYVASFVG
FAPYDNPQIS VMVSVDNPKN GEYYGGRVAA PLAGMLLQNI FNYIDLTEFH LDEKLPEKET
VIIPEVRGLP INDATSMLKE LSISYEIEGE GEFIVESNPA PGYPISPDTK ITLIAGDSSN
LNSDVIIPDF KNYSKESAEK LLNQLGLIGE FVGEGPSVTK QSISPDEVVN GNSKITLTLG
Y
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