| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0541 |
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| Symbol | treB |
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| ID | 4203920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 643462 |
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| End bp | 644883 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638081423 |
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| Product | PTS system, trehalose-specific IIBC component |
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| Protein accession | YP_694995 |
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| Protein GI | 110800828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000364471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGT TTGAAAAAGA TGCAAAGTTA CTAACAGAGT ACATAGGCGG AAAAGAAAAC
GTAGCTGCAG TTACTCACTG TGCTACAAGA ATGAGATTCG TTTTAAATGA TACAAGCAAA
GCAGATGTTG AAAAAATAAA AGCTATTCCT TGTGTAAAAG GAACTTTTAC ACAAGCAGGA
CAGTTTCAAG TAATAATTGG ACCAGAAGTT GCAACTTTTT ATAATGATTT TGTTGGACAG
ACTGGAGTAT CTGGAGAAAG TAAGGAAGAA GTCAAGAAGG CTGCTAAGAA GAATATGAAT
ATAGTTCAGA GAGCAGTTGC AGGCTTAGCA GAAATATTTG CTCCGTTAAT ACCAGCTATC
ATAGTTGGAG GTCTTATATT AGGATTCCGT AATGTAATCG GAGATATGAA ATTATTTGAA
GATGGAACTA AGAGTTTAGT TGAAATTTCT CAATTCTGGG CAGGAACACA TAGTTTCTTA
TGGTTAATAG GAGAGGCAAT ATTCCACTTC TTACCTGTAG GAGTTGTTTG GTCAATTGCT
AAGAAAATGG GAGCAGATCA AATGCTAGGA ATAGTTATTG GTATAACTTT AGTATCTCCA
CAATTATTAA ATGCATATAG TGCAGGTAAT GGAGCCGCTG CTCCAGTTTG GGACTTTGGA
TTTGCTCAAG TTCCAATGAT AGGATATCAA GCACAAGTTT TACCAGCAAT CATGGTTGGA
TTCACTTTTG TTTACTTAGA AAGATTATTT AAGAAGATTA CACCAGGTCC TATACAAATG
ATAATAGTAC CATTTTTCTC AGTAATTCCA ACAGTATTAT TAGCACACAC TGTTTTAGGA
CCTATAGGTT GGAAAATAGG TAGCGTAATA TCAGGAGCTA TAGTGGCAGG CTTAACATCA
TCATTTGGAT GGTTATTTGC AGGAATTTTT GGAATGATTT ATGCACCATT AGTTATAACA
GGATTACATC ATACTTTATT ACCAGTTGAT TTACAACTTA TAAGTGATAT AGGTGGAACA
TTCTTATGGC CAATAATTGC ATTATCAAAT ATAGCTCAAG CATCAGCAGT TTTAGCTATG
ATATATGTAA ATAGAAAAGA TGAAGATGAA AAACAAATAT CAATACCAGC ATGTATTTCA
GGATATTTAG GGGTAACTGA ACCTGCAATG TTTGGGGTTA ACTTAAAATA TCTATATCCA
TTCATAGCTT CTATGATTGG AGCAGGAGTT TCTGGTATGT TCTCAATGGC AATGGGATGT
ATGGCAAACT CAGTAGGAGT TGGTGGATTA CCAGCAATCT TATCAATGCA ATCATCTAGT
ATGTTAATGT ATTTAGTTGC AATGGGAATA GCAATAGTTG TACCATTCAT CTTAACAATA
GTGTTCTCAA AGACAAAATT AGCTAATATG GCTTCAAAAT AA
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| Protein sequence | MSKFEKDAKL LTEYIGGKEN VAAVTHCATR MRFVLNDTSK ADVEKIKAIP CVKGTFTQAG
QFQVIIGPEV ATFYNDFVGQ TGVSGESKEE VKKAAKKNMN IVQRAVAGLA EIFAPLIPAI
IVGGLILGFR NVIGDMKLFE DGTKSLVEIS QFWAGTHSFL WLIGEAIFHF LPVGVVWSIA
KKMGADQMLG IVIGITLVSP QLLNAYSAGN GAAAPVWDFG FAQVPMIGYQ AQVLPAIMVG
FTFVYLERLF KKITPGPIQM IIVPFFSVIP TVLLAHTVLG PIGWKIGSVI SGAIVAGLTS
SFGWLFAGIF GMIYAPLVIT GLHHTLLPVD LQLISDIGGT FLWPIIALSN IAQASAVLAM
IYVNRKDEDE KQISIPACIS GYLGVTEPAM FGVNLKYLYP FIASMIGAGV SGMFSMAMGC
MANSVGVGGL PAILSMQSSS MLMYLVAMGI AIVVPFILTI VFSKTKLANM ASK
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