| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0537 |
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| Symbol | |
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| ID | 4203314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 638514 |
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| End bp | 639650 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638081419 |
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| Product | glycine betaine/L-proline transport, ATP-binding protein |
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| Protein accession | YP_694991 |
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| Protein GI | 110801237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.418471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAA TAAAAAATGT ATCTAAACAA ATAGGGGACA GAAAGATACT AGATAATATT
TCTTTAACTA TTGATAAAGG AAGTCTAGTT GTTTTAATAG GTTCTAGTGG ATGCGGTAAA
ACAACTACTT TAAAACTTAT AAATAAGTTA ATAACACCTA CTTCTGGTGA AATATTTATA
AATGGGAAAT CTTTAGCCAA GGAAAACCCT ATTGAATTAA GAAGAAATAT TGGATACGTA
ATTCAGAATA ATGGATTATT TCCACATTTA ACAATAAAGG AAAATATAGA GCTTATTCCA
AGACTAAAGA AAGGCAAAGA TGTTGAAAAA ATAGAGAAGA CAACTTTAGA CCTTTTAAAT
ATGGTTGGAT TGGATCCTGA AATTTATTTA AATAAGTATC CATCAGAGCT TAGTGGAGGA
CAGCAACAGA GAGTAGGTTT TGCAAGAGCC TTTGCTACAG ATGCTGAGAT AATTTTAATG
GACGAGCCCT TTAGTGCTTT AGATCCAATA ACTCGTACTT CACTTCAGGA AGAGCTTTTT
AATATTCAAG AGGAACTTAA AAAGACAATT ATTTTTGTTA CTCATGATAT GGATGAAGCT
TTAAAGATAG CAGATAAAAT ATGCATAATG AATGGAGGAA AAATAGCTCA ATATGATACT
CCAGAAAATA TACTTAGAAA TCCAGCAAAT GATTTTGTTA GAGATTTTAT AGGATCAGAT
AGGGTTTGGA ATAATCCTGA CTTCATAAAA GCAAAGGATA TAATGATAAA AAATCCTGTA
TCTGTTAAAG GTGCTAGAAC CATATTACAA GGAATCGAAA TAATGAGAAG TAATAAGGTT
GATAGTTTAT TAGTTATTGA TAAAGAAAAT GTACTTAAAG GTATTGTTAC TTTTAAAGAT
ATAAAAATTA CAAATGAAAA ATCAAGAGCA CTTTCAGAAA TTATGAGTGA AAATCCACTA
AGAGTTAATG AAGATGATAG TTTAGTTGAT ATTTTAACTG TAATGAATGA GAACTCAGTA
GGATTTATAC CTGTTGTTAA CTCAGAAGAA AAATTGGTAG GGCTTATAAC AAGAAGTAGT
TTACTTTCAA TATTAAGCGA CCAATTTTTA GACATGGAGG TGAATATATT TGAATAG
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| Protein sequence | MIEIKNVSKQ IGDRKILDNI SLTIDKGSLV VLIGSSGCGK TTTLKLINKL ITPTSGEIFI
NGKSLAKENP IELRRNIGYV IQNNGLFPHL TIKENIELIP RLKKGKDVEK IEKTTLDLLN
MVGLDPEIYL NKYPSELSGG QQQRVGFARA FATDAEIILM DEPFSALDPI TRTSLQEELF
NIQEELKKTI IFVTHDMDEA LKIADKICIM NGGKIAQYDT PENILRNPAN DFVRDFIGSD
RVWNNPDFIK AKDIMIKNPV SVKGARTILQ GIEIMRSNKV DSLLVIDKEN VLKGIVTFKD
IKITNEKSRA LSEIMSENPL RVNEDDSLVD ILTVMNENSV GFIPVVNSEE KLVGLITRSS
LLSILSDQFL DMEVNIFE
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