Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0523 |
Symbol | |
ID | 4201912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 620264 |
End bp | 621655 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081405 |
Product | amino acid/peptide transporter |
Protein accession | YP_694977 |
Protein GI | 110801311 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0562889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGG CAATTAAATC TACTGATTTT GAGGTAGAAA AAGGCAATGG ACGATTAAAG CATCCAGCAG GACTATACCT TTTATTCTTC ACAGAAATGT GGGAAAGATT TAGTTACTAT GGAATGAGAG CTTTATTAAT GCTTTACTTA ACAGCATCAT TTGTGACTGG CGGATTAGGA TATGATGTAC CTAGTGCAGC TAGAATATAT GGAGCTTATA CTTTTTTAGT TTACTTTACA CCAATAATTG GTGGAGAAAT AGCAGATAAG TTTTTAGGAC AGAAAAAATC AATTATGCTT GGGGCAGCAG TAATGATTTT AGGTAACTTA ACTTTATTTG GATGGCAAAC TAGATGGGCT TTATACTTAG GATTAGGGTT CATAATAGTA GGAAATGCTT TCTTTAAACC AAATATATCA ACAATAGTTG GTCAATTATA TGAAGATGGT GACAAGAGAA AAGATTCAGC TTTCACAATA TTCTACATGG GAATAAACTT AGGATCTTTA ATAGCACCAA TAATATGTGG ATTATTAGCA GAAAACTTTT TTGCTACAAA ATCAGGAGAA GTAATACTTC ACTATGGATT TAGATACGGA TTCTTAGCAG CAGGTATAGG TATAATATTA GGAGAAATTA TCTTTATAAC TTTATCTCCA AAATACTTAG CACATGTTGG TGAAATTAAA AGAGAAAAAA ATAAAAAAGA TGTTGCAAAA GAAAAGAAAC CTTTAACTAA GCAAGAGAAG AAGAGAGTTG CAGTTATATT AATACTTGCA TCATTCGTTG TATTCTTCTG GGCAGGATTT GAACAAGCAG GTACAACTTT AACATTATTT GCTGAAAATG CAACTAATAG AAGTTTATTT GGATGGACAG TACCAGTAGC ATTCTTCCAA TCTATAAACC CATTATTTAT ACTAATATTA GCACCATTAT TCTCAAAATT ATGGTTTACA CTTGCTAACA GTAAAAGAGG GGATTTATCA ATCCCAACTA AAATGGCTAT GGGTATGATA GTTTTAGGAT GTGGATTCTT ATTAATGGTT TTCGCAACTA TGTCATTAGG TGGAAATGTT GAAAATCCAG CAGTTAAAGC TAGTATGTTC TGGTTAGTAG GAACTTACTT ATTTAACACA ATGGGAGAAC TTTGTTTATC ACCAATAGGA CTTTCAATGG TAAGTTCATT AGCACCAGCT AAATACGCTT CATTATTAAT GGGTGTATGG CTTGCTAGTA ACGGAGTAGC AAACTACTTA TCAGGATTCA TAGCATCATT TGTTGAAAAA CTAGGAGCTT TAGAACTATT TGGTTCAATA GCTGGAGTAA GTATAGTATT AGGTTTAGTA CTATTACTAT TAAGCAAAAA GATTACAGCT ATGATGGAAT AA
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Protein sequence | MAEAIKSTDF EVEKGNGRLK HPAGLYLLFF TEMWERFSYY GMRALLMLYL TASFVTGGLG YDVPSAARIY GAYTFLVYFT PIIGGEIADK FLGQKKSIML GAAVMILGNL TLFGWQTRWA LYLGLGFIIV GNAFFKPNIS TIVGQLYEDG DKRKDSAFTI FYMGINLGSL IAPIICGLLA ENFFATKSGE VILHYGFRYG FLAAGIGIIL GEIIFITLSP KYLAHVGEIK REKNKKDVAK EKKPLTKQEK KRVAVILILA SFVVFFWAGF EQAGTTLTLF AENATNRSLF GWTVPVAFFQ SINPLFILIL APLFSKLWFT LANSKRGDLS IPTKMAMGMI VLGCGFLLMV FATMSLGGNV ENPAVKASMF WLVGTYLFNT MGELCLSPIG LSMVSSLAPA KYASLLMGVW LASNGVANYL SGFIASFVEK LGALELFGSI AGVSIVLGLV LLLLSKKITA MME
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