Gene CPF_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0516 
Symbol 
ID4201624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp614301 
End bp614942 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content30% 
IMG OID638081398 
Producthypothetical protein 
Protein accessionYP_694970 
Protein GI110801123 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT TATCTATTGT TTTAACTGGT TTTGGCCTTG CTATGGATGC TTTTGCCGTA 
TCAGTTGCTA AGGGAATAAC CCTTACTAGA GTAAAAGCTA AAGATGCATT AAAAGTTGCT 
TTATTCTTTG GAGGATTTCA AGCACTTATG CCTTTAATAG GATGGGGAGC TGGGAGATAT 
TTCGCTGATT ATATAAAAGC CTTTGATCAT TGGATAGCAT TTATATTATT AGGTTTCATA 
GGGGGAAAAA TGATTTTTGA AGCTTTAAAA GAAGATGATG AAGAAAAAGC TGAGGTTGCA 
GTATCAATGG AAGTTAGCAA AAATAAAGAG AGAGAATTTG CTAATATGAA ACGCAAAGAG 
GAGCTAAGTG CTAAAAATCT TACAGTATTA GCTATTGCAA CTAGTATTGA TGCCTTAGCA 
GTTGGGGTTA GTTTTGCATT CTTAGGTATT TCTATAGTTC AAACTATAAT AATAATTGGT 
ATTATAACTT TTGTTTTATG TTTTTTAGGG GTAATAATAG GTGAAAAATT AGGAGATATA 
TTTAAAAACT ATGCTGAAAT AGTAGGTGGA GTTATATTAA TTCTTATAGG TATAAATATA 
TTATTAGAAC ATACAGGAAT TATTGAAAAG TTATTTTCTT AG
 
Protein sequence
MSILSIVLTG FGLAMDAFAV SVAKGITLTR VKAKDALKVA LFFGGFQALM PLIGWGAGRY 
FADYIKAFDH WIAFILLGFI GGKMIFEALK EDDEEKAEVA VSMEVSKNKE REFANMKRKE 
ELSAKNLTVL AIATSIDALA VGVSFAFLGI SIVQTIIIIG IITFVLCFLG VIIGEKLGDI 
FKNYAEIVGG VILILIGINI LLEHTGIIEK LFS