Gene CPF_0480 details

Gene Information

• Locus tag: CPF_0480
• Symbol: rfbC
• ID: 4202979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 569550
• End bp: 570119
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638081362
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_694935
• Protein GI: 110800202
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACT TTAAATTTAT AGAAACAAAA ATAAAAGATT TATATATTAT AGAACCAAAA 
GTTTTTGGAG ATGAAAGAGG ATATTTCATG GAAACATATA GTCAAAAAGC TTTTGAAGAA 
GCTGGACTTA CTATGAAATT TGTTCAAGAT AATGAATCAA AATCTAAAAA AGGTGTTTTA 
AGAGGATTAC ATTTCCAAAC TAAACATACT CAAGGAAAGC TTGTTAGAGT AACTCAAGGA 
GAGGTTTGGG ATGTAGCTGT AGATTTAAGA AAAGGATCAC CTACATTTGG ACAATGGGAA 
GGTGTTCATT TAAGTGCAGA AAATAAAAGA CAATTCTACG TTCCAGAAGG ATTTGCTCAT 
GGATTTGTAG TTTTATCTGA TGAAGCTGTA TTTAACTATA AATGTACAGA TTTTTATGCT 
CCAGAATATG ACAGTGGACT TCTTTGGAAT GATAAATATG TTAATGTAGA ATGGCCTTTA 
GAAGGAATAG AAGAAATAAT CTTATCAGAA AAAGATAAGA AACAAAAAAC TTTAAAAGAA 
TTAGATATTC CTTTTATATA TGAAGGTTAA 

 

Protein sequence

MSNFKFIETK IKDLYIIEPK VFGDERGYFM ETYSQKAFEE AGLTMKFVQD NESKSKKGVL 
RGLHFQTKHT QGKLVRVTQG EVWDVAVDLR KGSPTFGQWE GVHLSAENKR QFYVPEGFAH 
GFVVLSDEAV FNYKCTDFYA PEYDSGLLWN DKYVNVEWPL EGIEEIILSE KDKKQKTLKE 
LDIPFIYEG