| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0478 |
|---|
| Symbol | |
|---|
| ID | 4202380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 567223 |
|---|
| End bp | 568551 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 21% |
|---|
| IMG OID | 638081360 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_694933 |
|---|
| Protein GI | 110799188 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.038549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TACATTATAA TTTAGGGTTA CCGCCATATA GGAGCGGAGG ATTAACAAAA
TATAGTACTG ATTTAATGAT TGAGCAATCA AAAAATAAGG AAATTTATTT GTTGTTTCCT
GGAAGATATA CTATAAATAA TAAATTTAAA ATAAAAAAAT TTAAAAAATT TAGAAATATT
AAAGTTTTTG AGATTTTAAA TCCTAAACCA GTTCCATTAA TGGGTGGTGT AGAGAATATT
GATGAATTTA TAAAACCTAT AGAAAATTGT AGGAAAGAAT CTTTAAAATT TTTAAATACT
ATAAATCCAG ATATTATACA TATTCATACA CTTATGGGTT TACCAATTGA ATTTATAAGA
GCAGCGAAAG AATTAAAAAT AAAAATTATA TTTACTACTC ATGATTATTA TGGATTATGT
CCTAAAGTTA ATTTTTTAAA ATGTAATGGT TGCTTAAATA TGTGCTATGA ATGTAATAAA
AATTCATATA GTATAACAAA AATTAAGATA ATGCAATCAG GTGTTTATAG AACATTTAAA
GAATCATCAA TAATTAAGTA TATTAGAAAA AATGTAAAGA AAAATGATTT AAAAAAAGAA
AGCAATAAAG TATTAAATGG AGATTCTGTG TTAGAAAAAA ATTCGGAATA TGAAAAATTA
AGAGGGTATT ATATAGAAAT TTTAAATCTA TTTGATAAAT TACATTTTAA TAGTAGTATA
ACAAAAGATG TTTATAATAA GTTTTGTAAA ACAAATGGTG ATATTATTTC CATAACACAT
TCAAGTATTA AAGATAATAG ATTAATAAAA GATTTTAAGA ATAAAAAATT AAGAATACTT
TTTTTAGGGT CATTAGATGA ATATAAAGGT TGTTTATATC TTATAAATGT TTTAAAAGAG
ATAAATAGTT CTTTATGGGA ATTAAATATA TATGGAAATG ATTACCAAAT TGATTTTGGA
AATGAAAATA TTCATTTAAA TGGAAGGTAT ATGCAAAAAG AACTATCTAG TATCATGAAA
AATAATGATA TATTAATTGT ACCAAGTTTA TGGAAAGAAA CTTTTGGATT TACTTTACTC
GAAGGCCTCA GTAATGCAAT TCCTATAATT GCAACTGATA CTGTTGGTTC TAAAGATTTA
ATTAAAAATA ATAAAACTGG AATTATAATT AAAAAAGATT TAATGAAAGA AACTATAAAG
AATTTAATTT ATAATAGAGA GATTCTTGAA GAGATAAATA AAAATATAAT AAAAGATAAA
TATGTTTTTG AAATGAAAAA TCATGAAAAA ATCATAGAGG AATATTATAA AAACATTATA
AAGGAATAG
|
|---|
| Protein sequence | MKILHYNLGL PPYRSGGLTK YSTDLMIEQS KNKEIYLLFP GRYTINNKFK IKKFKKFRNI
KVFEILNPKP VPLMGGVENI DEFIKPIENC RKESLKFLNT INPDIIHIHT LMGLPIEFIR
AAKELKIKII FTTHDYYGLC PKVNFLKCNG CLNMCYECNK NSYSITKIKI MQSGVYRTFK
ESSIIKYIRK NVKKNDLKKE SNKVLNGDSV LEKNSEYEKL RGYYIEILNL FDKLHFNSSI
TKDVYNKFCK TNGDIISITH SSIKDNRLIK DFKNKKLRIL FLGSLDEYKG CLYLINVLKE
INSSLWELNI YGNDYQIDFG NENIHLNGRY MQKELSSIMK NNDILIVPSL WKETFGFTLL
EGLSNAIPII ATDTVGSKDL IKNNKTGIII KKDLMKETIK NLIYNREILE EINKNIIKDK
YVFEMKNHEK IIEEYYKNII KE
|
|---|
| |