| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0475 |
|---|
| Symbol | |
|---|
| ID | 4201436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 563631 |
|---|
| End bp | 564848 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 638081357 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_694930 |
|---|
| Protein GI | 110800565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000101664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT GTAAATGGTA TAAAAATGCA ATATCTCCTG TTATATTTAT GATAGATGAT
TTGGCTAATG TATGGGTTGA TTCAAATAAC AATGATAGTT TAGATATTGG TGAAGATTGG
GGATTTTTTA AAAGACATGA AAAATCATCA ATTACATATT TAGAAAATGA TATTTTAGAA
AAGTTTGAGA ATGTAAAAAC AACTTTTTTT GTACCAGTTG GAGAACGAGT AGGAATGATA
AAGAATTCTA AAATAAAGTC TATATCTAGA GCAATAAATT TTGATGAAAA ATCTAAAGAA
TTCTTTAGAG AATTGCATAA CTGTAAAAAA TATGAATTAG CTTATCATGG CACAAATCAT
GGGAGAGTTG GAATTAAAAA TACTGATTTT ATACAAGAGT GGGCACTATT TAAAGATTTA
AATGAAGCAC TAGATAAAAT ATCATTAGGA GTAAGTATAT TTAATGACGC AGTTGGGCAA
TTACCTTTAG GGGGTAAATA TTGTGGATAT ATAAGCAATG AGTTTTCAGA TGAAAGTATA
GATGAATCTG GATTTATTTG GTGGTGTAGG TTTTGTAACT TAGATGTATA TGATGATATT
AAAAAGAATA GTATGAAAAT TAATTTTAAT GGAGGTGATA AAAATTTTAT TACAAATAAT
GATGTTAAAT ATTTTGGGAA AAATAAAGTG ATTGATATAC CGACAACAGT TAATGGTGGA
TTATTAACTG GAATATATAA TTTAAATGGA AATTTTCTTA AGAAAAGTAT TAAAAAAATC
TTTCCAAATT TACTTATAAA AAGAAAGTTG AAATTAATAG ATAAATTATT ACAAAATAAT
TTAGTTATTT CAATACAAGA ACATATTTCA CCAGCTAGAG ATGATGGAAG AAGACAAACA
CCAAATATAT ATGATGATAA GCTAAGTTTA ATTAAAATAT TTAGTTATTT GCATGATAAA
AATGTATGGT TTTGTACATG TTCAGAATTG GCTAGTTATG TATATTATAG AGATAACTTG
AAACTAACTA TAGAAAATGA TACATTTGAA TTTAATATAA AAGAATTAAA AGACTATAAA
TTTAAAAATA TATCGATAAA ATCAGATAAA TATAATAAAA TAATAACACC TAAAGGAAAA
GTAATTAAAG AAGAAAATGG AGTTTTAAAC ATTCCTATTG AATATGGAAA ATATAAATTA
AAAAAAGGAG AACTTTAG
|
|---|
| Protein sequence | MKICKWYKNA ISPVIFMIDD LANVWVDSNN NDSLDIGEDW GFFKRHEKSS ITYLENDILE
KFENVKTTFF VPVGERVGMI KNSKIKSISR AINFDEKSKE FFRELHNCKK YELAYHGTNH
GRVGIKNTDF IQEWALFKDL NEALDKISLG VSIFNDAVGQ LPLGGKYCGY ISNEFSDESI
DESGFIWWCR FCNLDVYDDI KKNSMKINFN GGDKNFITNN DVKYFGKNKV IDIPTTVNGG
LLTGIYNLNG NFLKKSIKKI FPNLLIKRKL KLIDKLLQNN LVISIQEHIS PARDDGRRQT
PNIYDDKLSL IKIFSYLHDK NVWFCTCSEL ASYVYYRDNL KLTIENDTFE FNIKELKDYK
FKNISIKSDK YNKIITPKGK VIKEENGVLN IPIEYGKYKL KKGEL
|
|---|
| |