| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0472 |
|---|
| Symbol | |
|---|
| ID | 4201350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 559699 |
|---|
| End bp | 561078 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 21% |
|---|
| IMG OID | 638081354 |
|---|
| Product | putative capK protein |
|---|
| Protein accession | YP_694927 |
|---|
| Protein GI | 110801005 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000021402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAA GTTTTGTAGA TAAAATACCA GAAATATTTT TTGCTCCATT AGAATTTCTT
AATAATAAAA TTTTTAAGAA ATTAATAAAA AGTAGAAAAT ATAAAAAAAT ATATAAGAAT
ACTATTAATG AAATAAAAAG ATTTGAGATA ATGAATTCAA GTGAAATAGA AGAATTTTCA
TTTAAAAAAT TAAAAAAATT ATTAATATAT GCTTTTGAAA ATGTACCATA TTACAATAAT
TTATTTAATT CAATAAACTT TAATCCTAAT TATATGAAAA ATATATCTGA AATAAAAAAA
ATACCTTTAT TAGATAAAAG AATAATAAAC GAAAATTATA ATAATCTTAT ATCAAATGAA
TTTAAGAATA ATAAATCAAA ATTAATTAAA TTATCCACTG GTGGAAGTAC AGGCAAGCCT
TTAGAATTTT TAAGTCTTAA ATATTATAAT GAAGCTAGAG AAAATGCATT TATAGATTAT
ATATTTAGCA AGAATGGATA TAAAAAAGAT ATGAGAACAA TAATTTTAAG AGGAGATAAA
GTAAGAAATA TAGATAAAAA AAAAGCTAAA AATATATATT GGAGAAAAAA AAGAGGAACA
AATGATCTTA TTATGTCTAC TTATATGCTT AATGATGTAA GTTGTATTTT CTACATAAAA
AAATTAATTA AATACAAGGC GAAGTGCATA AAGGCCTATC CAAGTGCTTT AGAATTATTA
GCTAATAAGA TGATTAGCAT GAATTTAAAA AATAAGGATG TAGAATTGAT AATTTGTGCA
TCAGAAAATT TAAGTTGTAT GCAAATAGAT ATCTTTAAAA AAGTTTTTTG TAATGCTAAA
ATATTTGATT TTTATGGTCA TACGGAACAT TGTTGCTTAG CAGAGTTAAA CAATAAAAAT
AAATACACTT TTATACCGAA TTATGGATAC GTTGAATTAG AAGAAAATGA TGATGGGAGT
TTTGAGATAG TTTGCTCTGG CTATAACAAT TATGTTATGC CTTTCATTAG ATATAAAACC
GGAGATTTAG TTAAAGATTT TAATTTTATA GATGGAAAAT TAGAGGTTAA TAAGATAGAA
GGTAGAAAAA AAGAGTATAT TATTGATAAA CTAGGTAATA AAATAGTTTT TACAGGATCA
TATAAAATAC TAGATTGTGT AATAAATAAG ATTTTAGCTG GACAAATAAT TCAAGAAAAC
ATAGGACATT TGTATGTTGA TGTTATTGTT AATGAAAAAT TTGAGGATAA TGATAAAAAT
TCTATAATTT TAGCATTTAA ATCTAAATAT AAAGATAGAT TTGATGTTGA TGTAAGGATA
GTAAAAGAGC TAAGAAAAAC CAGTAGAGGA AAGATTAATT TCTTTATTCA GTGTATTTAA
|
|---|
| Protein sequence | MYKSFVDKIP EIFFAPLEFL NNKIFKKLIK SRKYKKIYKN TINEIKRFEI MNSSEIEEFS
FKKLKKLLIY AFENVPYYNN LFNSINFNPN YMKNISEIKK IPLLDKRIIN ENYNNLISNE
FKNNKSKLIK LSTGGSTGKP LEFLSLKYYN EARENAFIDY IFSKNGYKKD MRTIILRGDK
VRNIDKKKAK NIYWRKKRGT NDLIMSTYML NDVSCIFYIK KLIKYKAKCI KAYPSALELL
ANKMISMNLK NKDVELIICA SENLSCMQID IFKKVFCNAK IFDFYGHTEH CCLAELNNKN
KYTFIPNYGY VELEENDDGS FEIVCSGYNN YVMPFIRYKT GDLVKDFNFI DGKLEVNKIE
GRKKEYIIDK LGNKIVFTGS YKILDCVINK ILAGQIIQEN IGHLYVDVIV NEKFEDNDKN
SIILAFKSKY KDRFDVDVRI VKELRKTSRG KINFFIQCI
|
|---|
| |