Gene CPF_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0457 
Symbol 
ID4202000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp543568 
End bp544077 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content29% 
IMG OID638081341 
ProductDedA family protein 
Protein accessionYP_694914 
Protein GI110800642 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00277812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTG GAACTATAAC AAACTATTTT TCAGAGTACG GGCTTTTATT TTTATTTGTG 
ATTATTCTTT TAGAATATAT GAATTTACCG GGGCTTCCTG CAGGAATAAT AATGCCCGCA
GTTGGAGTTT TAGTTTCTAA AAGTGAAATG AGTCTTATAA CAGCACTTTT GGTATCTGTA
ATAGCAGGTC TAATAGGAAG TTGGATACTT TATTGCATAG GAAGATTTGG AGGAGAATTA
ATTCTTAAAA AATATCTAAA TAAATTTCCA AGTCACGAAA GCTTTGTAAA TAGCAAAATT
GATTATTTAA GAGAAAAGGG TTATACAGGA ATTTTAATAA GCAAACTAAT TCCAATGGCT
AGGACAGTAA TATCAATACC AGCAGGAGTT TTGAAATTAA ATTTTCTTAA GTATAGTGTT
TATGCAACTT TAGGCATTTT TATATGGAAT ACAGTTTTAA TATCATCAGG ATATTTCTTG
GGAGAGGAAT TATTAAAATT TTTAGGATAG
 
Protein sequence
MDFGTITNYF SEYGLLFLFV IILLEYMNLP GLPAGIIMPA VGVLVSKSEM SLITALLVSV 
IAGLIGSWIL YCIGRFGGEL ILKKYLNKFP SHESFVNSKI DYLREKGYTG ILISKLIPMA
RTVISIPAGV LKLNFLKYSV YATLGIFIWN TVLISSGYFL GEELLKFLG