Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0457 |
Symbol | |
ID | 4202000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 543568 |
End bp | 544077 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081341 |
Product | DedA family protein |
Protein accession | YP_694914 |
Protein GI | 110800642 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00277812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTG GAACTATAAC AAACTATTTT TCAGAGTACG GGCTTTTATT TTTATTTGTG ATTATTCTTT TAGAATATAT GAATTTACCG GGGCTTCCTG CAGGAATAAT AATGCCCGCA GTTGGAGTTT TAGTTTCTAA AAGTGAAATG AGTCTTATAA CAGCACTTTT GGTATCTGTA ATAGCAGGTC TAATAGGAAG TTGGATACTT TATTGCATAG GAAGATTTGG AGGAGAATTA ATTCTTAAAA AATATCTAAA TAAATTTCCA AGTCACGAAA GCTTTGTAAA TAGCAAAATT GATTATTTAA GAGAAAAGGG TTATACAGGA ATTTTAATAA GCAAACTAAT TCCAATGGCT AGGACAGTAA TATCAATACC AGCAGGAGTT TTGAAATTAA ATTTTCTTAA GTATAGTGTT TATGCAACTT TAGGCATTTT TATATGGAAT ACAGTTTTAA TATCATCAGG ATATTTCTTG GGAGAGGAAT TATTAAAATT TTTAGGATAG
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Protein sequence | MDFGTITNYF SEYGLLFLFV IILLEYMNLP GLPAGIIMPA VGVLVSKSEM SLITALLVSV IAGLIGSWIL YCIGRFGGEL ILKKYLNKFP SHESFVNSKI DYLREKGYTG ILISKLIPMA RTVISIPAGV LKLNFLKYSV YATLGIFIWN TVLISSGYFL GEELLKFLG
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