Gene CPF_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0448 
Symbol 
ID4203805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp533302 
End bp533970 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content21% 
IMG OID638081332 
Producthypothetical protein 
Protein accessionYP_694905 
Protein GI110800425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00788476 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAATTATTAA AGACTTAAAA AATATAAGAG TAATATTTAT ATTTTATATC 
CTTACAATGA CTTTTGGATA TTCTCCTTTT TTTATAGACT TACCGAAAGA TAGATATGAT 
TTTTTAATAA ATAGTGTTTT CATTTATTTT ACCTTGTTAG CTTCAATGAT TAGTGTTAAT 
TTTATAATTG CAAAAAATAC TAATAAAGGA GCAATGACAA ATAAATTATT AAGATCACTG 
CCAATTGATG CAAGAAGTGT AGTAGGCACA TCTTTTATAT TACCTATATT AATTTTTTTA 
ATATTTTCTT TACCAAATAT ATTAGTAGGT ATGGGTGTAA GTTTTATGTT AGGAGAAAAA 
ATCATTGTAA ATCCATTTAA TTTACTTTTA ACATTTATAA TTTTCTATAT ATATGCATCA 
ATAACATTTA GTATGGCAAT TATATACCCA GAGAGCAGTG TAGTATCTTA TTTAAGAAGC 
GTTCCATTAT TTATATTAAT AATCGGTCTT GCTTTAGTAG AAAAATTTAT GAAAAATATA 
AATTATGATG TTTCAAATAT TTTAAATTCA TTACCTCTTG TGGTACTTAT ATTAGCAGTA 
ATATCAATAT TTATATTAAT TGTTTTTTAC AAGTTTTCCT TAAATAAATT TATAAGAAAA 
GAATTATAA
 
Protein sequence
MKNLIIKDLK NIRVIFIFYI LTMTFGYSPF FIDLPKDRYD FLINSVFIYF TLLASMISVN 
FIIAKNTNKG AMTNKLLRSL PIDARSVVGT SFILPILIFL IFSLPNILVG MGVSFMLGEK 
IIVNPFNLLL TFIIFYIYAS ITFSMAIIYP ESSVVSYLRS VPLFILIIGL ALVEKFMKNI 
NYDVSNILNS LPLVVLILAV ISIFILIVFY KFSLNKFIRK EL