Gene CPF_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0376 
SymboldeoB 
ID4202579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp453344 
End bp454534 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content33% 
IMG OID638081260 
Productphosphopentomutase 
Protein accessionYP_694833 
Protein GI110799655 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1015] Phosphopentomutase 
TIGRFAM ID[TIGR01696] phosphopentomutase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAT ATAAAAGAAT TTTTACAATA GTAATAGATT CATTAGGAAT AGGTGCAATG 
AATGATTCAG AAAAATATGG AGATGTTAAT GTTGATACAT TAGGACACAT TGCTGAATCA
GTAGACACAT TTAATATACC TAATCTTCAA AAAATGGGTA TAGCAAACTT ACACCCAATA
AAACACGTAG CTCCAGTTGA GAATCCAATA GGATACCAAG CTAAAATGGC TGAAGCAAGT
GTTGGTAAAG ATACAATGAC AGGACACTGG GAAATGATGG GCTTACACAT AACTAAGCCA
TTTAAAACTT TCACAGATAC TGGATTCCCA CAAGAATTAT TAGATGAGTT AACAGCAAGA
ACTGGTCATA AAATAGTAGG AAACAAGAGT GCTAGTGGAA CAGAAATCCT AGATGAATTA
GGAGAACACC AAATTGCAAC TGGAGATATG ATAGTTTATA CATCAGCAGA TTCAGTTTTA
CAAATTTGTG GTCAAGAAGA AACTTTCGGC TTAGAAGAAT TATATAGATG CTGTGAAATC
GCAAGAGAAT TAACTCTTAA AGATGAATGG AAAGTTGGAA GAATCATAGC AAGACCTTAC
TTAGGAACTA AAAAAGGTGA ATTCAAGAGA ACAAGCAATA GACATGACTA TGCTCTTAAA
CCATATGGAA GAACAGTTCT TAATGAATTA AAAGATAACA ACTTTGATGT TATTTCAGTT
GGTAAAATAA AAGATATATT TGATGGAGAA GGAATAACAG AAGGAAATAA ATCTAAGAGT
TCAGTTCACG GTATGGAACA AACATTAGAA ATAATGGATA GAGACTTTAC TGGATTCTGC
TTTGTTAACT TAGTTGACTT TGATGCTTTA TGGGGACATA GAAGAAATCC TCAAGGTTAT
GCAGAAGAAT TAGAAAAATT CGATGTTAAC TTAGGAAAAG TATTAGAAAA GTTACATGAA
GATGATTTAT TAATAATAAC AGCTGACCAT GGTAATGACC CAACATACAC TGGAACAGAT
CACACTCGTG AGTATGTACC ATTCTTAGCT TATTCACCAT CAATGAAAGG TCATGGACAA
TTAGAAACTC CAAAAACATT TGCAACTATT GGAGCAACAA TTGCTGATAA CTTTGGATTA
AAAATGCCAG AAGGAACAAT TGGTGAATCA GTTCTAAATA AATTAGTTTA A
 
Protein sequence
MSKYKRIFTI VIDSLGIGAM NDSEKYGDVN VDTLGHIAES VDTFNIPNLQ KMGIANLHPI 
KHVAPVENPI GYQAKMAEAS VGKDTMTGHW EMMGLHITKP FKTFTDTGFP QELLDELTAR
TGHKIVGNKS ASGTEILDEL GEHQIATGDM IVYTSADSVL QICGQEETFG LEELYRCCEI
ARELTLKDEW KVGRIIARPY LGTKKGEFKR TSNRHDYALK PYGRTVLNEL KDNNFDVISV
GKIKDIFDGE GITEGNKSKS SVHGMEQTLE IMDRDFTGFC FVNLVDFDAL WGHRRNPQGY
AEELEKFDVN LGKVLEKLHE DDLLIITADH GNDPTYTGTD HTREYVPFLA YSPSMKGHGQ
LETPKTFATI GATIADNFGL KMPEGTIGES VLNKLV