Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0354 |
Symbol | cls |
ID | 4202702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 423044 |
End bp | 424579 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081238 |
Product | cardiolipin synthetase |
Protein accession | YP_694811 |
Protein GI | 110798654 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00517773 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT TTCTGAAAAA ACTACTAAGT AGAGCATTTA TAGTTGGATT TCTTATATTC ATACAGTTTG TTATACTTAT GGGGGCAATA TGGAAAGTAA GCGAAGATTT CATATATGTA TATTTTCTGT TTATCTTTAT TAGTATAGTA GTATTTATTT ATATTGTTAG TAGAAAAGAT AATCCATCCT ATAAATTAGC ATGGGCGGTT CCTGTATTAT TAGTTCCTGT CTTTGGAGGA TTATTTTATT TAATATTTGG TGGAAATAAG ACAAGCAAAA AGTTTAGAAA ACAAATAAAA GCTTCTTATG ATGAAACAGC ACATTTATTA TATAATGATA GAAAAGTTTT AGATGAGTTA GAAGAACAAG ATAAAAGTAT AGCTAATCAA TCAAGGTACA TAGCTGATTA CTCTCAGTTT CCAGTATATA AAAATACTAC AACTGAGTAT TTATCTCCTG GAGAGGTATT TTTTGAAAGG TTAAAGGAAG AGTTAAAAAA GGCAAAGCAC TACATATTTA TGGAATATTT CATAGTACAT GAAGGAGTTA TGTGGAACTC TATTTTAGAA ATATTAGAGG AAAAGGTTAA AGAAGGTGTA GAGGTTAGAT TCGTTTATGA TGATATGGGA TGCTTAGGAA CTTTACCATA TAAGTATAAT GAAGTTTTAG AGGCTAAGGG AATTAAATGT ATGGTATTTA ATCCTTTTGT GCCCCTTTTA TCCTTAAGAA TGAATAACCG TGATCATAGA AAAATAACTG TTATAGATGG GCATACTGGG TTTACTGGGG GAATAAACTT AGCTGATGAA TACATAAATG AAATTGTTAG ATTTGGACAT TGGAAGGATG CCTCCATAAT GATAAAGGGG GATGCTGTTT GGAATTTAAC AGTTATGTTT CTTCAAATAT GGAATTTCTA TAGTGAAAGA AAAGAGCAGT ATGAAAAATA TTACCCATAT TTTCATCATG AAGATGAATT TGAAAGTGAT GGATATGTTC AGCCCTATGG AGATAGTCCT TTAGATGATG AAATAGTAGG GGAAAATGTA TATTTAAATA TTATAAATAA GGCAAAGGAC TATGTTTATA TAAATACTCC ATACCTTATT ATTGATAATG AACTTGTTAC AGCGCTTACT CTTGCTGCTA AAAGTGGAAT AGATGTTAGA ATAGTTACTC CTCATATTGA GGACAAATGG TATGCTCATA TAGTTACAAG GGCCTATTAT CCTCAACTTA TAGAATCTGG TGTTAAGATA TATGAATATA CTCCAGGATT TATTCACTCA AAGACCTTTG TATCTGATGA TGAAATAGGA ATAGTAGGTA CTATAAATAT GGATTATAGA AGTTTATATC TTCACTTTGA ATGTGGAGTT TGGCTATATA AAACTAAATC TGTAGGACAG ATAAAAGATG ATTTCTTAAA AACTTTAGAA AAATGTCAAA GAATAACTTT AGAAGATTGT GCTAAGGTTA AAGTTCCTAC TAGAATTTTA AGGTCTATAA TAAGAGTATT TGCTCCACTT ATGTAA
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Protein sequence | MEKFLKKLLS RAFIVGFLIF IQFVILMGAI WKVSEDFIYV YFLFIFISIV VFIYIVSRKD NPSYKLAWAV PVLLVPVFGG LFYLIFGGNK TSKKFRKQIK ASYDETAHLL YNDRKVLDEL EEQDKSIANQ SRYIADYSQF PVYKNTTTEY LSPGEVFFER LKEELKKAKH YIFMEYFIVH EGVMWNSILE ILEEKVKEGV EVRFVYDDMG CLGTLPYKYN EVLEAKGIKC MVFNPFVPLL SLRMNNRDHR KITVIDGHTG FTGGINLADE YINEIVRFGH WKDASIMIKG DAVWNLTVMF LQIWNFYSER KEQYEKYYPY FHHEDEFESD GYVQPYGDSP LDDEIVGENV YLNIINKAKD YVYINTPYLI IDNELVTALT LAAKSGIDVR IVTPHIEDKW YAHIVTRAYY PQLIESGVKI YEYTPGFIHS KTFVSDDEIG IVGTINMDYR SLYLHFECGV WLYKTKSVGQ IKDDFLKTLE KCQRITLEDC AKVKVPTRIL RSIIRVFAPL M
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