Gene CPF_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0354 
Symbolcls 
ID4202702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp423044 
End bp424579 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content30% 
IMG OID638081238 
Productcardiolipin synthetase 
Protein accessionYP_694811 
Protein GI110798654 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00517773 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT TTCTGAAAAA ACTACTAAGT AGAGCATTTA TAGTTGGATT TCTTATATTC 
ATACAGTTTG TTATACTTAT GGGGGCAATA TGGAAAGTAA GCGAAGATTT CATATATGTA
TATTTTCTGT TTATCTTTAT TAGTATAGTA GTATTTATTT ATATTGTTAG TAGAAAAGAT
AATCCATCCT ATAAATTAGC ATGGGCGGTT CCTGTATTAT TAGTTCCTGT CTTTGGAGGA
TTATTTTATT TAATATTTGG TGGAAATAAG ACAAGCAAAA AGTTTAGAAA ACAAATAAAA
GCTTCTTATG ATGAAACAGC ACATTTATTA TATAATGATA GAAAAGTTTT AGATGAGTTA
GAAGAACAAG ATAAAAGTAT AGCTAATCAA TCAAGGTACA TAGCTGATTA CTCTCAGTTT
CCAGTATATA AAAATACTAC AACTGAGTAT TTATCTCCTG GAGAGGTATT TTTTGAAAGG
TTAAAGGAAG AGTTAAAAAA GGCAAAGCAC TACATATTTA TGGAATATTT CATAGTACAT
GAAGGAGTTA TGTGGAACTC TATTTTAGAA ATATTAGAGG AAAAGGTTAA AGAAGGTGTA
GAGGTTAGAT TCGTTTATGA TGATATGGGA TGCTTAGGAA CTTTACCATA TAAGTATAAT
GAAGTTTTAG AGGCTAAGGG AATTAAATGT ATGGTATTTA ATCCTTTTGT GCCCCTTTTA
TCCTTAAGAA TGAATAACCG TGATCATAGA AAAATAACTG TTATAGATGG GCATACTGGG
TTTACTGGGG GAATAAACTT AGCTGATGAA TACATAAATG AAATTGTTAG ATTTGGACAT
TGGAAGGATG CCTCCATAAT GATAAAGGGG GATGCTGTTT GGAATTTAAC AGTTATGTTT
CTTCAAATAT GGAATTTCTA TAGTGAAAGA AAAGAGCAGT ATGAAAAATA TTACCCATAT
TTTCATCATG AAGATGAATT TGAAAGTGAT GGATATGTTC AGCCCTATGG AGATAGTCCT
TTAGATGATG AAATAGTAGG GGAAAATGTA TATTTAAATA TTATAAATAA GGCAAAGGAC
TATGTTTATA TAAATACTCC ATACCTTATT ATTGATAATG AACTTGTTAC AGCGCTTACT
CTTGCTGCTA AAAGTGGAAT AGATGTTAGA ATAGTTACTC CTCATATTGA GGACAAATGG
TATGCTCATA TAGTTACAAG GGCCTATTAT CCTCAACTTA TAGAATCTGG TGTTAAGATA
TATGAATATA CTCCAGGATT TATTCACTCA AAGACCTTTG TATCTGATGA TGAAATAGGA
ATAGTAGGTA CTATAAATAT GGATTATAGA AGTTTATATC TTCACTTTGA ATGTGGAGTT
TGGCTATATA AAACTAAATC TGTAGGACAG ATAAAAGATG ATTTCTTAAA AACTTTAGAA
AAATGTCAAA GAATAACTTT AGAAGATTGT GCTAAGGTTA AAGTTCCTAC TAGAATTTTA
AGGTCTATAA TAAGAGTATT TGCTCCACTT ATGTAA
 
Protein sequence
MEKFLKKLLS RAFIVGFLIF IQFVILMGAI WKVSEDFIYV YFLFIFISIV VFIYIVSRKD 
NPSYKLAWAV PVLLVPVFGG LFYLIFGGNK TSKKFRKQIK ASYDETAHLL YNDRKVLDEL
EEQDKSIANQ SRYIADYSQF PVYKNTTTEY LSPGEVFFER LKEELKKAKH YIFMEYFIVH
EGVMWNSILE ILEEKVKEGV EVRFVYDDMG CLGTLPYKYN EVLEAKGIKC MVFNPFVPLL
SLRMNNRDHR KITVIDGHTG FTGGINLADE YINEIVRFGH WKDASIMIKG DAVWNLTVMF
LQIWNFYSER KEQYEKYYPY FHHEDEFESD GYVQPYGDSP LDDEIVGENV YLNIINKAKD
YVYINTPYLI IDNELVTALT LAAKSGIDVR IVTPHIEDKW YAHIVTRAYY PQLIESGVKI
YEYTPGFIHS KTFVSDDEIG IVGTINMDYR SLYLHFECGV WLYKTKSVGQ IKDDFLKTLE
KCQRITLEDC AKVKVPTRIL RSIIRVFAPL M