Gene CPF_0341 details

Gene Information

• Locus tag: CPF_0341
• Symbol: uvrC
• ID: 4202089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 405519
• End bp: 407381
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 638081228
• Product: excinuclease ABC subunit C
• Protein accession: YP_694801
• Protein GI: 110800325
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATT TTCAACACCA ATTAAAGATA TTGCCTGATA AACCAGGAGT TTATATAATG 
AAAAATTCTC TTGGAGAAGT TATTTATGTA GGAAAAGCAA AGGTATTGAA AAATAGAGTA 
AGGCAATATT TTCAAAACTC TAAGAATCAC TCTGAAAAAG TTAGAGCTAT GGTTAAGAAT 
ATAGCTGAAT TTGAGTACAT AGTTACTGAT TCTGAAATGG AAGCATTAAT TTTAGAATGT 
AATCTTATCA AGAAATACAG TCCAAGATAT AACATAGCCT TAAAGGATGA TAAGTTTTAT 
CCCTTTATAA AAATAACCAC TAATGAGGAT TTTCCAAGGG TTTATGTTAC AAGGAATTTT 
GCTAAGGATG GAAATAGATA TTTTGGACCA TATACCAATG GTACAGCCGT TTATGAGGTT 
ATGGGGCTTA TAAAGAAGTT ATTCCCATTA AGAACCTGTA AAAAGGCCAT TGTGGAAGGT 
GGAGAGCCTA CGAGAGCATG TTTAAATTAT CATATTAACC TTTGTAAAGC TCCTTGTGCT 
GGCTATATAT CTAAGGCTGA GTACTGGGAA ATGATAGATG AAATTATAAA CATTTTAAAT 
GGTACAGACA CATCCATAAT AAAAAAATTA AAATTAGAGA TGGAAAAAGC TGCAGAAGAA 
TTAGAGTTTG AAAAAGCAGC TAAAATTAGA GATAGAATTT TGGCCATAGA ATTGATTAGC 
GAAAAACAAA AAATGTTTAC TGTAAAAGAG GGCGATGAGG ATTTTATAGA CTTATATACT 
GATGAAAAAG ATGGATGTGC TCAAGTTTTC TTTGTTAGAG AGGGAAAAGT TACAGGCAGA 
GAGCACTTTA TGATTGAAAA TATTAGTGAT GATCCAGTTA AAGAGGTAAT AAGTTCCTTT 
ATAGCATCCT TTTATGGAGG AACTGCACAA ATACCTAAGA CTATCTATGT GCCAGAGGAA 
ATAGAGGATC AAGAGCTTAT AGAAAAGTTT CTTACAGAAA AAAGAGGATC TAAGGTTTGG 
ATAAAAGTCC CTAAGAAGGG GGATAAAAAG AATCTTTTAG ATATGGTTAG AAATAATGCT 
AAGATAATGC TTGATCAATT TAAAGAAAAA ATGGTTGAGG AAAAAGAGTT AAATAAGTCT 
GCCTTAACTG AACTGGCAGA TGTTTTAGGA TTAGATTCTT TGCCTGCTAG AATAGAGGCT 
TATGATATAT CCAATATACA GGGTGTAGAC TCAGTAGGAA CCATGGTAGT CTTTGAAAAT 
GGAAAAGCAA AAAATTCAGA TTATAGGAGA TTTAAGATAA AAAGTGTTAA AGGTCCTAAT 
GATTATGAAA GTATGAGAGA AATATTAAGC AGAAGATTTT CTCATGGATT AGAGGAAGTA 
AATAAAATAA AAGAGAGAAA TTTAGAATAC TCAAAGGGAA AGTTTTGTAT TTTCCCAGAC 
TTGATAATGA TGGATGGGGG AAAAGGGCAA GTAAACATAG CCTTAGAGGT TCTAAAGGAC 
TTTGGTATAG AAATTCCTGT CTGTGGCCTT GTTAAAGACC ATAAACATAG AACTAGAGGA 
ATTATATTCA ATAACGAAGA AATCCTCATT AGAAGGGGTT CAGGCCTTAT GAATCTAATA 
ACTAGAGTTC AGGATGAGGT TCATAGATAT GCCATAACAT ATCATAGGAG TTTAAGAGAT 
AAAAGAACCT TACATTCCAT ATTAGAAGAT ATACCTAGAA TTGGGGAAAA GAGAAGAAGA 
AATCTTCTTA TGAAGTTTGG AAGTATAGAT AATATTAAAA AGGCATCTAT GGAAGAATTA 
TTAGATACAC CAGGGATAGA CAAAAGAGCA GCAGAGAGTA TAAAACAATA TTTTTCAAGT 
TAA 

 

Protein sequence

MFDFQHQLKI LPDKPGVYIM KNSLGEVIYV GKAKVLKNRV RQYFQNSKNH SEKVRAMVKN 
IAEFEYIVTD SEMEALILEC NLIKKYSPRY NIALKDDKFY PFIKITTNED FPRVYVTRNF 
AKDGNRYFGP YTNGTAVYEV MGLIKKLFPL RTCKKAIVEG GEPTRACLNY HINLCKAPCA 
GYISKAEYWE MIDEIINILN GTDTSIIKKL KLEMEKAAEE LEFEKAAKIR DRILAIELIS 
EKQKMFTVKE GDEDFIDLYT DEKDGCAQVF FVREGKVTGR EHFMIENISD DPVKEVISSF 
IASFYGGTAQ IPKTIYVPEE IEDQELIEKF LTEKRGSKVW IKVPKKGDKK NLLDMVRNNA 
KIMLDQFKEK MVEEKELNKS ALTELADVLG LDSLPARIEA YDISNIQGVD SVGTMVVFEN 
GKAKNSDYRR FKIKSVKGPN DYESMREILS RRFSHGLEEV NKIKERNLEY SKGKFCIFPD 
LIMMDGGKGQ VNIALEVLKD FGIEIPVCGL VKDHKHRTRG IIFNNEEILI RRGSGLMNLI 
TRVQDEVHRY AITYHRSLRD KRTLHSILED IPRIGEKRRR NLLMKFGSID NIKKASMEEL 
LDTPGIDKRA AESIKQYFSS