Gene CPF_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0316 
Symbol 
ID4203568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp373842 
End bp374465 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content30% 
IMG OID638081203 
ProductDedA family protein 
Protein accessionYP_694776 
Protein GI110800594 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.414992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TAGGATCTCT ATTAACATTT TTAATTGATA TTGTAGGTTC CTTTGGATAC 
TTTGGAATCT TATTAATAGT TGGGTTAGAA TATGCTTGTT TCCCATTACC TAGTGAAGTG 
GTTTTAACCT TCTTTGGTCT TAGTGCATCT CAAGGAGAAT TTTCACTTAT TGGAGTTATA 
ATATTTAGTA TTATAGGTGG ATTATTAGGT TCATTAATCT GTTACGCCAT TGGCTACTAT 
GGTGGTGTCC CTCTTCAAGA ATGGTTAGGA CGTAAATTTC CAAGCAGTCA AAAAAGTATG 
TTAGCATTAA ATAAATGGTT TAAAAAATAT GGAAAGCCAG CTGTATTGCT AGCTAGGATA 
GTTCCACTTA CTCGTACATA TGTATCTTTA TTAGCTGGCG CTGAGAAATT CAGCTTAAAA 
TATTTCATCT TATACTCTTC TTTAGGTATA AGTATTTGGA ACATTTTTTT AGTTTCCTTA 
GGATATTTTA TAGGTGATAA TCTACCACTT ATAAATTCAA TAATGGAGAA ATACACCTTT 
GTCACTTTAG CTATTTTAAT TATTGCTGTG ATTATTTTCA TTTATCTTAA ATTTTTCAAA 
AAAGAAAAGA ACACATCAAA ATAA
 
Protein sequence
MEFLGSLLTF LIDIVGSFGY FGILLIVGLE YACFPLPSEV VLTFFGLSAS QGEFSLIGVI 
IFSIIGGLLG SLICYAIGYY GGVPLQEWLG RKFPSSQKSM LALNKWFKKY GKPAVLLARI 
VPLTRTYVSL LAGAEKFSLK YFILYSSLGI SIWNIFLVSL GYFIGDNLPL INSIMEKYTF 
VTLAILIIAV IIFIYLKFFK KEKNTSK