Gene CPF_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0304 
Symbol 
ID4201965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp361573 
End bp362577 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content30% 
IMG OID638081191 
Productputative lipase 
Protein accessionYP_694764 
Protein GI110800490 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.726693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTAAAAGT AGTAGGAGTT ATATTACTAA GTTTAATAAT TATGATTGGA 
GCTTTAGCTT ATTATTTTAG AGGACAAATA GGTTTTTATA TAAACATAGG AAAAGAGTAT
TTAGAGTTTA AGGAAAATCC ACCTAGTATT GAGGATTTAA AGAACATTAA AATGAGTGAG
GATATGGATT TTAAGGATGT AGTTTATAAA GATACTAATG GAAAAGCTCA GACTTTAGAT
ATTTATGGAC CAGAAAAGAA GTTAAGACAT GGGTCACCAG TAATTCTTTA TGTTCATGGA
GGAAGTTGGG TTTATGGAAA CAAAGAAATA CCAGATCTTA TAGCACCTCT TTTAGATTCC
TTTAGAAAAG AAGGATATAC CATAATAAGT GTAGGGTATG AACTTGCTAC TGATAAGGTT
GATTTTAAGA AACAAGCTTC AGATGTTAAG GATGCCATAA GATGGGTTTA TAAAAATAAA
GAAACTTATA GATTTAACAC TGATGAAATA GGAGTTATAG GGGCTTCTGC TGGGGCACAT
TTATCCTTGT TAGCCACATA TAGTGGGGAA GATGAATTTG TTGATGATAA GGAACTCTCT
AACTATCCAT CAAAGGTTAA ATATGTTGTA GATTTCTTTG GACCAACTGA ACTTAGTGCC
TTAGACATGA CTATGGCTTC ATGGGATTTA AATAATTCAA TAGAGAAAAC TGAAAAGCAA
TTAAGAGGGG AAGAAAGTAT AACAGAATAC ATGGATAAAT ATAGTCCAAT AAATTATGTT
AAGCCTAACT TACCAAAGAC TTTAATAGTT CATGGACGTC AAGATAAATT GGTTCCATAC
AGTAATTCAA TGAACTTATA TAATAAGAGC AAGGATATGG GTAATGATAT TCAAATACTT
ACCTTAGAAA ATAGTGGCCA TGATTTTTCT CAAGTTGATG TAAATGAAGT ATTTGAACTT
GGGTTTAAAG TTTTAAACTT TATACTTTTT AATACTAAGT TTTAA
 
Protein sequence
MKKFLKVVGV ILLSLIIMIG ALAYYFRGQI GFYINIGKEY LEFKENPPSI EDLKNIKMSE 
DMDFKDVVYK DTNGKAQTLD IYGPEKKLRH GSPVILYVHG GSWVYGNKEI PDLIAPLLDS
FRKEGYTIIS VGYELATDKV DFKKQASDVK DAIRWVYKNK ETYRFNTDEI GVIGASAGAH
LSLLATYSGE DEFVDDKELS NYPSKVKYVV DFFGPTELSA LDMTMASWDL NNSIEKTEKQ
LRGEESITEY MDKYSPINYV KPNLPKTLIV HGRQDKLVPY SNSMNLYNKS KDMGNDIQIL
TLENSGHDFS QVDVNEVFEL GFKVLNFILF NTKF