Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0275 |
Symbol | |
ID | 4203552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 330533 |
End bp | 331282 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081162 |
Product | hypothetical protein |
Protein accession | YP_694735 |
Protein GI | 110800155 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.343318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATTTAA CTTTAGTTAA CGAAAATGAA ACTCTTGATG ATCTACAGTT AGATGGATTA CATCTAATTC AGAAAAAAGA AGGGTTTAGA TTTGGAGTGG ATGCTGTTTT ACTAGCTAAT TTTGCTAATG TTAACAGAAA ACATTCTGTA TTAGATTTGT GCACAGGTAC AGGAATAATT CCTTTTATTA TTTACGGAAA AAAAAATCCT AAAGAAGTAG TTGGAATTGA GATACAAGAA GAATTTGCTG AAATGGCAAA TAGAAGTGCA AAGATTAATA ATATTGAAGA TAAAGTATCT TTTGTATGTG GCGATTTAAA GGATAAAGAG CTTAATAAAT TAATGCCTAA ATTTGATGTT GTTACAGTAA ATCCTCCATA TAAGTTAAAT AATGCAGGTA TTGTAAATCC AGAAGATAAA CTTGCTATAG CTAGACATGA GATTATGTGT AATTTAGAGG ATGTTATAGC AGTAAGTAGA AGATTTCTAA AGGATAATGG AAGACTTTAT ATGGTACATA GACCTGAAAG GTTAGCTGAT ATATTTTGTC TTATGAGAAA ATATAAAATA GAGCCTAAAA GGGTTAGAAT GGTTCATCCT AATACAAAAA AAGCTGCAAA CATAGTTTTA GTAGAAGGTC AAAGAGACGG CGGAGCTTTC TTAAAATGGG AAGCACCTTT ATATGTGTAT AAAGATGAAG GTGGATATAG TGAAGAAATA GATAAGATAT ATGGAAGGGA GAGTAAATAA
|
Protein sequence | MDLTLVNENE TLDDLQLDGL HLIQKKEGFR FGVDAVLLAN FANVNRKHSV LDLCTGTGII PFIIYGKKNP KEVVGIEIQE EFAEMANRSA KINNIEDKVS FVCGDLKDKE LNKLMPKFDV VTVNPPYKLN NAGIVNPEDK LAIARHEIMC NLEDVIAVSR RFLKDNGRLY MVHRPERLAD IFCLMRKYKI EPKRVRMVHP NTKKAANIVL VEGQRDGGAF LKWEAPLYVY KDEGGYSEEI DKIYGRESK
|
| |