Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0264 |
Symbol | |
ID | 4203725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 319180 |
End bp | 320352 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081151 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_694725 |
Protein GI | 110799827 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGTTG CTATAAGAGT TAAAGACTTA ACTAAAAAAT ATAAGTTATA TCAAAAGAGA TCTGAAAGAT TAGCGAATGC TTTTGGTAAA GAAAAGAATA TAAAAGAATT TTATGCTTTA AAGGGCGTTT CTTTTGAGAT AAGCAAGGGA GAATGTGTTG GTATTATCGG TCATAATGGG GCCGGTAAAT CAACACTTTT AAAATTACTA ACAGGAGTGG CTTTCCCTAC TTCTGGAGAG ATTGAGATAA ATGGAAGATT AGCATCTATG CTAGAATTGG GGTCAGGATT TAATCCTGAG CTTACTGGTA TGGAAAATAT TTATTTTAAT GGTAGTTTAA ATGGTTTAAC TAAGGAAGAG ATAGATGGAA AATTAAAGGA TATACTTGAG TTTGCTGATA TAGGTAATTT TATAGAGCAA CCAGTAAAAA ATTATTCAAG TGGTATGTTT GCTAGATTAG CATTTGCCGT TGCTATTAAT GTAGACCCTG ATATATTAAT AGTTGATGAA ATTTTATCCG TTGGAGATGT TGGTTTCCAA GTTAAATGTA TGGAAAAATT CAATGAATTT AAGAAAAAGG GAAAAACAAT ACTTTATGTT TCTCATGGAC TTGGAACAGT GAAAAAGTTC TGTGACAGAG CAATTTGGCT TCAAAAAGGT GAAGTTGTAG ATGATGGGAA TTCCGTAATT GTAGTAGAAA GATACTATAA TTTAAATTTT AATCCTGCTA ATATAGAACA ATTAAAAGAT CATAAAAGTG ACATAATAAA TAGTATAGCA GTTAAATCTA ATACAAAAAA TGTAGAATAT CTTGAAAAAT TAGATTTAGA GGTTGAATAT GATCTTATTT CAAATGACTT AAAAGACCCT AACATAGTTT TAGAGTTTAG AAAAACTGAC TATGAGCCAG GTACAACTAG AGGAAATGAT CAGTTTGTTT GTGGTATAAA TAGTAAAGAT AATATAAAAA ATATTCCTTT TAATTTAGGA GTTAATAAGT TAAAAGTGTC TTTAAATAAG GTTAACTTAG TTGCTGGAGT TTATTATATT GACTTTGTTT TAAGAGATGG TGAAGAGGAA GTATATAGAA AAATAAATGG ATATAGTTTT ACTTTGAATG ACAAGTATAG AGGAGAAGGT TTCTTAATAC TGGGGCATTC TTGGGGTAAT TAA
|
Protein sequence | MSVAIRVKDL TKKYKLYQKR SERLANAFGK EKNIKEFYAL KGVSFEISKG ECVGIIGHNG AGKSTLLKLL TGVAFPTSGE IEINGRLASM LELGSGFNPE LTGMENIYFN GSLNGLTKEE IDGKLKDILE FADIGNFIEQ PVKNYSSGMF ARLAFAVAIN VDPDILIVDE ILSVGDVGFQ VKCMEKFNEF KKKGKTILYV SHGLGTVKKF CDRAIWLQKG EVVDDGNSVI VVERYYNLNF NPANIEQLKD HKSDIINSIA VKSNTKNVEY LEKLDLEVEY DLISNDLKDP NIVLEFRKTD YEPGTTRGND QFVCGINSKD NIKNIPFNLG VNKLKVSLNK VNLVAGVYYI DFVLRDGEEE VYRKINGYSF TLNDKYRGEG FLILGHSWGN
|
| |