Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0187 |
Symbol | cbiQ |
ID | 4201673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 224640 |
End bp | 225410 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081068 |
Product | cobalt ABC transporter, permease protein CbiQ |
Protein accession | YP_694651 |
Protein GI | 110800998 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACA TAGATAAATA TGCTTATGCA TCTAAGTTAA AAAATATTAA TCCAGCGGAA AAGATGTTTT TTGCCTTAAT TACTTTGTGC GTTTGTCTTT GGGCAAATAA TTTTATTGTT TCTATGCTTA TAATAAGTAT TATGACTTTT TTAATAACAA AAGTAGGAAG AACAAAAATA AGAGTTTTTA TAAAGTTAAT GATGGTACCA ATAGCTTTTT TAATAATTGG TATCCTAACA ATTGTTGTGA GTTATTCATT AAAACAGGAT ACATTTTTAG TATCATTTAA ACTTTTTAAT GGATGGATTG GAGTTTCAAA AAGTGGAATT ATTCAAGGAC TTAATATGTT CCTTAAGGTA ATGGGATCTT TAAGTTGCTT ATACTTTATA TCCTTAACCA CTCCAATGAT AGATGTAATA TCAGTTTTAG CTAAGCTTAA AGTACCAAGT TTTTTAATTG AGTTAATAAG CTTAGTGTAC AGATTTATAT TTATAATTTT AGAAACTTCA GAAATGATGT TTATATCGCA AAATTCAAGA CTTGGATATA GAGATATAAA AACATCATAT AAATCCTTAG GTGCTCTTGC ATCAACACTA TTTATACGTT CATTTAAGAG AGCTAATGAT TTATATACTG CCTTAGAAGC CAGAGGATAT AATGGAGAAC TTAAAGTTCT AGAAGAACAG GTTCAAAAAA GAAATTACAT TTACATTATA ACTATAATAA TTAATCTTAT TTTTATAGGA ATAGCTATAT TTATTAAGTA G
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Protein sequence | MINIDKYAYA SKLKNINPAE KMFFALITLC VCLWANNFIV SMLIISIMTF LITKVGRTKI RVFIKLMMVP IAFLIIGILT IVVSYSLKQD TFLVSFKLFN GWIGVSKSGI IQGLNMFLKV MGSLSCLYFI SLTTPMIDVI SVLAKLKVPS FLIELISLVY RFIFIILETS EMMFISQNSR LGYRDIKTSY KSLGALASTL FIRSFKRAND LYTALEARGY NGELKVLEEQ VQKRNYIYII TIIINLIFIG IAIFIK
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