Gene CPF_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0187 
SymbolcbiQ 
ID4201673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp224640 
End bp225410 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content26% 
IMG OID638081068 
Productcobalt ABC transporter, permease protein CbiQ 
Protein accessionYP_694651 
Protein GI110800998 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACA TAGATAAATA TGCTTATGCA TCTAAGTTAA AAAATATTAA TCCAGCGGAA 
AAGATGTTTT TTGCCTTAAT TACTTTGTGC GTTTGTCTTT GGGCAAATAA TTTTATTGTT
TCTATGCTTA TAATAAGTAT TATGACTTTT TTAATAACAA AAGTAGGAAG AACAAAAATA
AGAGTTTTTA TAAAGTTAAT GATGGTACCA ATAGCTTTTT TAATAATTGG TATCCTAACA
ATTGTTGTGA GTTATTCATT AAAACAGGAT ACATTTTTAG TATCATTTAA ACTTTTTAAT
GGATGGATTG GAGTTTCAAA AAGTGGAATT ATTCAAGGAC TTAATATGTT CCTTAAGGTA
ATGGGATCTT TAAGTTGCTT ATACTTTATA TCCTTAACCA CTCCAATGAT AGATGTAATA
TCAGTTTTAG CTAAGCTTAA AGTACCAAGT TTTTTAATTG AGTTAATAAG CTTAGTGTAC
AGATTTATAT TTATAATTTT AGAAACTTCA GAAATGATGT TTATATCGCA AAATTCAAGA
CTTGGATATA GAGATATAAA AACATCATAT AAATCCTTAG GTGCTCTTGC ATCAACACTA
TTTATACGTT CATTTAAGAG AGCTAATGAT TTATATACTG CCTTAGAAGC CAGAGGATAT
AATGGAGAAC TTAAAGTTCT AGAAGAACAG GTTCAAAAAA GAAATTACAT TTACATTATA
ACTATAATAA TTAATCTTAT TTTTATAGGA ATAGCTATAT TTATTAAGTA G
 
Protein sequence
MINIDKYAYA SKLKNINPAE KMFFALITLC VCLWANNFIV SMLIISIMTF LITKVGRTKI 
RVFIKLMMVP IAFLIIGILT IVVSYSLKQD TFLVSFKLFN GWIGVSKSGI IQGLNMFLKV
MGSLSCLYFI SLTTPMIDVI SVLAKLKVPS FLIELISLVY RFIFIILETS EMMFISQNSR
LGYRDIKTSY KSLGALASTL FIRSFKRAND LYTALEARGY NGELKVLEEQ VQKRNYIYII
TIIINLIFIG IAIFIK