Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0185 |
Symbol | cbiM |
ID | 4203268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 223602 |
End bp | 224345 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081066 |
Product | cobalt transport protein CbiM |
Protein accession | YP_694649 |
Protein GI | 110799393 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.878644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA AGAATCAAGT ATTTATAGGA TTTTTATTAA TGTTCTTATT AATACCAAGA AGTGTTTCAG CTATGCATAT CATGGAAGGA TTTTTACAAC CTAAATGGTG TATAGCATGG GGAGTTATAA CTATACCATT TATAGTATTA GGATTATTCT CTATTAAGAA TAAGGTTGGA AATAATCCAA GACTAAAGAT TTTATTAGCT ATGGCAGGAG CTTATGCTTT TGTTCTTTCA GCATTAAAGC TTCCATCAGT TACAGGTAGT TGCTCACATC CTACAGGAGT TGGTCTTGCA GCAATATTAT TTGGACCTAC AGCAGCATCA GTTTTAGGAC TTATCGTACT TTTATTCCAA GCATTACTTT TAGCTCATGG TGGTCTTACT ACTCTTGGAG CTAATACTTT TTCAATGGCT GTAGTTGGGC CTTTAGTATC ATACGGACTT TATAAATTAG TAAAAAAACT TAATGGACCA ACATGGTTAG GTGTATTTTT AGCATCTGCT CTTGGAGATT TAGCAACTTA CATGGTTACT TCAGTTCAAT TAGGACTAGC CTTCCCAGCA GAGGTTGGAG GAGTTATGGC ATCAGTTATG AAATTCATGG GTATATTTGC TGTTACTCAA GTTCCTCTAG CTATAAGTGA AGGAATATTA ACAGTCATAA TCTTTAATAC AATAGAAAAT TATGCAAAAG AAGATTTAAT GGAACTTAAC ATTTTTTCAA AGGGGGTAAA ATAA
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Protein sequence | MSKKNQVFIG FLLMFLLIPR SVSAMHIMEG FLQPKWCIAW GVITIPFIVL GLFSIKNKVG NNPRLKILLA MAGAYAFVLS ALKLPSVTGS CSHPTGVGLA AILFGPTAAS VLGLIVLLFQ ALLLAHGGLT TLGANTFSMA VVGPLVSYGL YKLVKKLNGP TWLGVFLASA LGDLATYMVT SVQLGLAFPA EVGGVMASVM KFMGIFAVTQ VPLAISEGIL TVIIFNTIEN YAKEDLMELN IFSKGVK
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