Gene CPF_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0185 
SymbolcbiM 
ID4203268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp223602 
End bp224345 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content33% 
IMG OID638081066 
Productcobalt transport protein CbiM 
Protein accessionYP_694649 
Protein GI110799393 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.878644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAA AGAATCAAGT ATTTATAGGA TTTTTATTAA TGTTCTTATT AATACCAAGA 
AGTGTTTCAG CTATGCATAT CATGGAAGGA TTTTTACAAC CTAAATGGTG TATAGCATGG
GGAGTTATAA CTATACCATT TATAGTATTA GGATTATTCT CTATTAAGAA TAAGGTTGGA
AATAATCCAA GACTAAAGAT TTTATTAGCT ATGGCAGGAG CTTATGCTTT TGTTCTTTCA
GCATTAAAGC TTCCATCAGT TACAGGTAGT TGCTCACATC CTACAGGAGT TGGTCTTGCA
GCAATATTAT TTGGACCTAC AGCAGCATCA GTTTTAGGAC TTATCGTACT TTTATTCCAA
GCATTACTTT TAGCTCATGG TGGTCTTACT ACTCTTGGAG CTAATACTTT TTCAATGGCT
GTAGTTGGGC CTTTAGTATC ATACGGACTT TATAAATTAG TAAAAAAACT TAATGGACCA
ACATGGTTAG GTGTATTTTT AGCATCTGCT CTTGGAGATT TAGCAACTTA CATGGTTACT
TCAGTTCAAT TAGGACTAGC CTTCCCAGCA GAGGTTGGAG GAGTTATGGC ATCAGTTATG
AAATTCATGG GTATATTTGC TGTTACTCAA GTTCCTCTAG CTATAAGTGA AGGAATATTA
ACAGTCATAA TCTTTAATAC AATAGAAAAT TATGCAAAAG AAGATTTAAT GGAACTTAAC
ATTTTTTCAA AGGGGGTAAA ATAA
 
Protein sequence
MSKKNQVFIG FLLMFLLIPR SVSAMHIMEG FLQPKWCIAW GVITIPFIVL GLFSIKNKVG 
NNPRLKILLA MAGAYAFVLS ALKLPSVTGS CSHPTGVGLA AILFGPTAAS VLGLIVLLFQ
ALLLAHGGLT TLGANTFSMA VVGPLVSYGL YKLVKKLNGP TWLGVFLASA LGDLATYMVT
SVQLGLAFPA EVGGVMASVM KFMGIFAVTQ VPLAISEGIL TVIIFNTIEN YAKEDLMELN
IFSKGVK