Gene CPF_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0177 
SymbolnanE 
ID4201411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp211176 
End bp211841 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content33% 
IMG OID638081058 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_694641 
Protein GI110800735 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGACG TGGTAAAAGG AAATTTAATA GTTTCTTGCC AAGCTTTATC AGATGAACCT 
TTGCATAGTT CTTTTATTAT GGGAAGGATG GCTATAGCAG CTAAGCAAGG TGGAGCAGCG
GCCATAAGAG CACAAGGCGT TAATGATATT AATGAAATAA AAGAAGTTAC TAAACTTCCT
ATCATTGGAA TAATAAAAAG AAATTACGAT GATTCAGAAA TTTATATAAC TCCAACTATG
AAGGAAGTGG ACGAGCTTTT AAAAACAGAT TGTGAAATGA TAGCATTAGA TGCTACAAAG
AGAAAAAGAC CTAATGGTGA AAATGTAAAG GATTTAGTTG ATGCTATTCA CGCAAAAGGA
AGATTAGCAA TGGCTGATAT ATCAACTTTA GAAGAAGGTA TTGAAGCAGA AAAATTAGGA
TTTGATTGTG TATCTACAAC ACTTTCAGGA TATACACCAT ATTCTAAGCA AAGCAACAGT
GTTGACTTTG AACTTTTAGA AGAGTTAGTA AAAACGGTAA AAATTCCAGT TATTTGTGAG
GGAAGAATAA ACACTCCAGA AGAACTAAAG AAAGCACTTG ATTTAGGTGC ATATTCAGCA
GTGGTTGGAG GGGCTATAAC AAGACCACAA CAAATAACTA AGAGATTTAC TGATATTTTA
AAATAA
 
Protein sequence
MLDVVKGNLI VSCQALSDEP LHSSFIMGRM AIAAKQGGAA AIRAQGVNDI NEIKEVTKLP 
IIGIIKRNYD DSEIYITPTM KEVDELLKTD CEMIALDATK RKRPNGENVK DLVDAIHAKG
RLAMADISTL EEGIEAEKLG FDCVSTTLSG YTPYSKQSNS VDFELLEELV KTVKIPVICE
GRINTPEELK KALDLGAYSA VVGGAITRPQ QITKRFTDIL K