Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0162 |
Symbol | argF |
ID | 4203134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 192972 |
End bp | 193967 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081043 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_694626 |
Protein GI | 110801213 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA ACTTAAAAGG AAGAAGCTTT TTAACATTAA AAGACTTTAC ACCAGCAGAA ATAAGATATT TATTAGATCT TTCTCATGAT TTAAAGGCTA AAAAGAGAGC TGGAATATTA GGAGATAGCT TAAAAGGTAA AAATGTAGTT TTACTATTTG AAAAAACTTC AACTAGAACA AGATGTGCTT TTGAATGTGG AGCTGCTGAA GAAGGTGCTC ATGTAACATT CTTAACTAAC TCACAAATGG GTAAAAAAGA ATCAATAGAA GACACTGCTA AGGTTCTTGG AAGAATGTAT GATGGTATTG AATTTAGAGG ATTCAAACAA TCAACTGTTG AAGAATTAGC TAAACATGCA GGTGTTCCAG TATGGAATGG ATTAACTGAC GCTGACCATC CAACTCAAAT ATTAGCAGAC TTCTTAACAA TAGAAGAACA TGCACATAAA CCATTAAGTG AAATCAAATT AGTATTTACT GGTGATACAA GAAACAATAT GAGTTATGCA TTAATGTATG GTGCAGCTAA AATGGGAATG CACTTTGTAG CTCTTGGACC AGATAGCTTA AAACCAGATG AAGATATTCT TAAAGAAATG CAAGAATACT CAAAAGAAAC TGGTGCAACT ATAGAATTTA GTTCAAATGT TGATGAAGCA GTTAAGGGTG CAGATGTTAT CTACACTGAT ATCTGGGTAT CAATGGGTGA AGATGAAAGC TTATATCCAG AAAGAGTTAA ATTATTAACT CCATACAAAG TTACTAGAGA AATGATGAAT AAAACAGGAA ATAAGAATAC TTTATTCATG CACTGCCTAC CATCATTCCA TGATGAAGAT ACAGAAGTAT GTAAAGATAT GATGGATAGA TTAGGTCTTG ATATAAGAGA AGTTGAAGAT GAAGTATTTA GAAGTAAAAA TTCAGTTGTA TTTGATGAAG CTGAAAACAG AATGCATACA ATCAAAGCAG TAATGGTAGC AACTGCTGGA AGATAA
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Protein sequence | MAVNLKGRSF LTLKDFTPAE IRYLLDLSHD LKAKKRAGIL GDSLKGKNVV LLFEKTSTRT RCAFECGAAE EGAHVTFLTN SQMGKKESIE DTAKVLGRMY DGIEFRGFKQ STVEELAKHA GVPVWNGLTD ADHPTQILAD FLTIEEHAHK PLSEIKLVFT GDTRNNMSYA LMYGAAKMGM HFVALGPDSL KPDEDILKEM QEYSKETGAT IEFSSNVDEA VKGADVIYTD IWVSMGEDES LYPERVKLLT PYKVTREMMN KTGNKNTLFM HCLPSFHDED TEVCKDMMDR LGLDIREVED EVFRSKNSVV FDEAENRMHT IKAVMVATAG R
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