Gene CPF_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0162 
SymbolargF 
ID4203134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp192972 
End bp193967 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content33% 
IMG OID638081043 
Productornithine carbamoyltransferase 
Protein accessionYP_694626 
Protein GI110801213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA ACTTAAAAGG AAGAAGCTTT TTAACATTAA AAGACTTTAC ACCAGCAGAA 
ATAAGATATT TATTAGATCT TTCTCATGAT TTAAAGGCTA AAAAGAGAGC TGGAATATTA
GGAGATAGCT TAAAAGGTAA AAATGTAGTT TTACTATTTG AAAAAACTTC AACTAGAACA
AGATGTGCTT TTGAATGTGG AGCTGCTGAA GAAGGTGCTC ATGTAACATT CTTAACTAAC
TCACAAATGG GTAAAAAAGA ATCAATAGAA GACACTGCTA AGGTTCTTGG AAGAATGTAT
GATGGTATTG AATTTAGAGG ATTCAAACAA TCAACTGTTG AAGAATTAGC TAAACATGCA
GGTGTTCCAG TATGGAATGG ATTAACTGAC GCTGACCATC CAACTCAAAT ATTAGCAGAC
TTCTTAACAA TAGAAGAACA TGCACATAAA CCATTAAGTG AAATCAAATT AGTATTTACT
GGTGATACAA GAAACAATAT GAGTTATGCA TTAATGTATG GTGCAGCTAA AATGGGAATG
CACTTTGTAG CTCTTGGACC AGATAGCTTA AAACCAGATG AAGATATTCT TAAAGAAATG
CAAGAATACT CAAAAGAAAC TGGTGCAACT ATAGAATTTA GTTCAAATGT TGATGAAGCA
GTTAAGGGTG CAGATGTTAT CTACACTGAT ATCTGGGTAT CAATGGGTGA AGATGAAAGC
TTATATCCAG AAAGAGTTAA ATTATTAACT CCATACAAAG TTACTAGAGA AATGATGAAT
AAAACAGGAA ATAAGAATAC TTTATTCATG CACTGCCTAC CATCATTCCA TGATGAAGAT
ACAGAAGTAT GTAAAGATAT GATGGATAGA TTAGGTCTTG ATATAAGAGA AGTTGAAGAT
GAAGTATTTA GAAGTAAAAA TTCAGTTGTA TTTGATGAAG CTGAAAACAG AATGCATACA
ATCAAAGCAG TAATGGTAGC AACTGCTGGA AGATAA
 
Protein sequence
MAVNLKGRSF LTLKDFTPAE IRYLLDLSHD LKAKKRAGIL GDSLKGKNVV LLFEKTSTRT 
RCAFECGAAE EGAHVTFLTN SQMGKKESIE DTAKVLGRMY DGIEFRGFKQ STVEELAKHA
GVPVWNGLTD ADHPTQILAD FLTIEEHAHK PLSEIKLVFT GDTRNNMSYA LMYGAAKMGM
HFVALGPDSL KPDEDILKEM QEYSKETGAT IEFSSNVDEA VKGADVIYTD IWVSMGEDES
LYPERVKLLT PYKVTREMMN KTGNKNTLFM HCLPSFHDED TEVCKDMMDR LGLDIREVED
EVFRSKNSVV FDEAENRMHT IKAVMVATAG R