Gene CPF_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0150 
Symbol 
ID4203330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp177937 
End bp178614 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content30% 
IMG OID638081031 
Producthypothetical protein 
Protein accessionYP_694614 
Protein GI110801253 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.113557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA AGAGTTTAAT AATTTTAAGT ATAATAGTTT TAATATTTGT ATGTATAACT 
CTTTATTTAA CTAGAGAGCA TATAATGGTT TTTTATAAAT TAATTACTAA TGGTGAAGTT 
GTAAAGAGTT ATCTTGAAAG GTTTGGTCCT TGGGCAGCAG TAATATTTTT TGTATTTCAA 
ATATTACAGG TTGTTATATT CTTTATTCCA GGAGAGGTTA TACAAGCTGC TGGGGGATAT 
ATATTTGGTG CCTTAGGAGG GACTTTACTT TCCTTTTTCG GCATAGCAGT TGGATCTGCA 
ATATTATTTT ACATATGTCA AAAGTTTGGA AAGAAGCTAG TACAAAGATT TGTACCTAAG 
GATATGTATG ATAAATTAGA AAAGATTTTA AATAGCCCTA AGTTTAAGCT TATATTGGTA 
ATACTATTCT TTTTACCAGG AGCACCTAAG GATTCACTTA TTATGGTTTG TGCCTTAAGT 
AACATAACAA TAGGACACTT TATAATATTC TCTATGATAG GAAGAATACC AGCCTTAGTT 
GCATCTTCTT TTATGGGAGC AAACTTAGCA GAGGGTAATA TTGTAGGAGT AATAATTATT 
GGTGTAATAG CCTTAATAGC TTGTGCTTTA GGGGTTATAT TCAGAAAAGA TGTCTTTAAG 
TACATGGAAA AACTTTAA
 
Protein sequence
MKKKSLIILS IIVLIFVCIT LYLTREHIMV FYKLITNGEV VKSYLERFGP WAAVIFFVFQ 
ILQVVIFFIP GEVIQAAGGY IFGALGGTLL SFFGIAVGSA ILFYICQKFG KKLVQRFVPK 
DMYDKLEKIL NSPKFKLILV ILFFLPGAPK DSLIMVCALS NITIGHFIIF SMIGRIPALV 
ASSFMGANLA EGNIVGVIII GVIALIACAL GVIFRKDVFK YMEKL