Gene CPF_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0145 
SymbolkptA 
ID4202751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp170504 
End bp171064 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content28% 
IMG OID638081026 
ProductRNA 2'-phosphotransferase-like protein 
Protein accessionYP_694609 
Protein GI110800227 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.71719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ATGATTCAAA GATAAGTAAA TACATAAGTT TAATACTAAG ACATAAGCCA 
GAAGAAATAG GATTAAAACT AGATGAGCAT GGATATTTAG GTGTATTAGA TTTGATAGAG
GGGCTAAATA AGTCCTATGA AGGATTTAGC ATGGATGATT TAGAAAGAAT AGTTAGAGAA
GATTCAAAGG GTAGATATTC TTTCAATGAG GATAAGAGCA AAATAAGAGC TAATCAAGGT
CATTCAATTA AAGTAGATCT AGGCTTAGAG CCTATTAAGC CACCAAAGGT TCTATATCAT
GGTACTGGAA GAAAATATTT AGAGTCAATT TTGAAAAATG GACTTATAAA GAAGGAAAGA
AATTATGTTC ATTTATCAAA GGATATAGAA ACTGCAAGTA TTGTTGGAAA AAGACATGGT
GATTTAGTTA TTTTAGAAGT AGATTCAGAG AGTATGTTTA ATGATGGAAT TAAGTTTTAT
TTATCTAAAA ATAATGTATG GCTTTGTAAT TATGTTCCAA AAAAATATAT TAAGGAATTA
AATTTAGAGG AAGTTTTTTA A
 
Protein sequence
MKNNDSKISK YISLILRHKP EEIGLKLDEH GYLGVLDLIE GLNKSYEGFS MDDLERIVRE 
DSKGRYSFNE DKSKIRANQG HSIKVDLGLE PIKPPKVLYH GTGRKYLESI LKNGLIKKER
NYVHLSKDIE TASIVGKRHG DLVILEVDSE SMFNDGIKFY LSKNNVWLCN YVPKKYIKEL
NLEEVF