Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0145 |
Symbol | kptA |
ID | 4202751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 170504 |
End bp | 171064 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081026 |
Product | RNA 2'-phosphotransferase-like protein |
Protein accession | YP_694609 |
Protein GI | 110800227 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1859] RNA:NAD 2'-phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.71719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA ATGATTCAAA GATAAGTAAA TACATAAGTT TAATACTAAG ACATAAGCCA GAAGAAATAG GATTAAAACT AGATGAGCAT GGATATTTAG GTGTATTAGA TTTGATAGAG GGGCTAAATA AGTCCTATGA AGGATTTAGC ATGGATGATT TAGAAAGAAT AGTTAGAGAA GATTCAAAGG GTAGATATTC TTTCAATGAG GATAAGAGCA AAATAAGAGC TAATCAAGGT CATTCAATTA AAGTAGATCT AGGCTTAGAG CCTATTAAGC CACCAAAGGT TCTATATCAT GGTACTGGAA GAAAATATTT AGAGTCAATT TTGAAAAATG GACTTATAAA GAAGGAAAGA AATTATGTTC ATTTATCAAA GGATATAGAA ACTGCAAGTA TTGTTGGAAA AAGACATGGT GATTTAGTTA TTTTAGAAGT AGATTCAGAG AGTATGTTTA ATGATGGAAT TAAGTTTTAT TTATCTAAAA ATAATGTATG GCTTTGTAAT TATGTTCCAA AAAAATATAT TAAGGAATTA AATTTAGAGG AAGTTTTTTA A
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Protein sequence | MKNNDSKISK YISLILRHKP EEIGLKLDEH GYLGVLDLIE GLNKSYEGFS MDDLERIVRE DSKGRYSFNE DKSKIRANQG HSIKVDLGLE PIKPPKVLYH GTGRKYLESI LKNGLIKKER NYVHLSKDIE TASIVGKRHG DLVILEVDSE SMFNDGIKFY LSKNNVWLCN YVPKKYIKEL NLEEVF
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