Gene CPF_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0133 
Symbolrbr 
ID4202607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp159162 
End bp159749 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content32% 
IMG OID638081014 
Productrubrerythrin 
Protein accessionYP_694597 
Protein GI110801055 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000905635 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTT TAAAAGGTAC TAAAACTGCT GAAAATCTAA TGAAATCATT CGCTGGTGAA 
TGCCAAGCAA GAACAAGATA TACTTATTTT TCAAGTACAG CTAGAAAAGA AGGTTATGTT 
CAAATATCAA ATATATTTTT AGAAACTGCT GAAAATGAAA AAGAACACGC TAAGAGATTT 
TATAAATTCT TAAAAGACGA TCTTCAAGGA GAAGCTGTAG AAATAAATGC TGCTTACCCA 
GTAGAATTAC CTACAGATAC ATTAACTAAC TTAAAATTTG CTGCTGACGG AGAACATGAT 
GAATTAAGTA ATCTTTATCC ATCATTTGCT GATGTAGCTG ACGAAGAAGG ATTCCCAGAA 
GTAGCTGCTG CTTTCAGAAT GATAGCTAAA GCAGAAACTG CTCACTATAA TAGATTTATG 
AAATTAGCTA AAAACATTGA AGAAGGAAAA GTATTCAAAA AAGATGAAGT AGTACTTTGG 
AAATGTGGAA ACTGTGGATT TATTTGGGAA GGTGCAGAAG CTCCATTAAA ATGCCCTGCA 
TGCTTACATC CACAAGCTTA CTTTGAAGTT TTCAAAGAAA CTTATTAA
 
Protein sequence
MKSLKGTKTA ENLMKSFAGE CQARTRYTYF SSTARKEGYV QISNIFLETA ENEKEHAKRF 
YKFLKDDLQG EAVEINAAYP VELPTDTLTN LKFAADGEHD ELSNLYPSFA DVADEEGFPE 
VAAAFRMIAK AETAHYNRFM KLAKNIEEGK VFKKDEVVLW KCGNCGFIWE GAEAPLKCPA 
CLHPQAYFEV FKETY