Gene CPF_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0130 
Symbol 
ID4202550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp155518 
End bp156756 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content33% 
IMG OID638081011 
Productcompetence damage-inducible protein A 
Protein accessionYP_694594 
Protein GI110799435 
COG category[R] General function prediction only 
COG ID[COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.135469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCTG AAATAATGGC AATAGGAACA GAAATACTTT TAGGAGACAT AGTAAATACC 
AATGCTCAAT TTTTAGCTAA GGAGTTAGCT AACTTAGGAA TTGGAGTTTA TCATCAATCA 
GTAGTTGGAG ATAATTCTGA AAGGATTTTA GAGGCTTTTG ACAATGCTTT TAAAAATTGC 
GATACAATTA TTACTACAGG TGGGTTAGGA CCTACTAAAG ATGATTTAAG CAAGGAGCTT 
GCAGCAAAGT ATTTCAATAT GGAAATGTGC TTAAGAGAAG AGCTTCTTTG TGATTTGGAG 
GATTATTTTA AGAAGAATAA CCTTGAAATG ACAGAGAACA ATAAAAAACA ATGTTATTTT 
CCAAAGGAGG CCATAATACT TCCAAACCCT AATGGAACAG CTCCAGGAGC TATTTTAGAA 
GGGGAAAATA ATAAGAGAAT AATACTTTTA CCAGGACCAC CAAGGGAAAT GGAGCCAATG 
TTTACAAACC ATGTAGTACC ATACTTAAGT AAATTTACTG ATAGTGTTTT AGTATCTAAA 
ATTTTAAGAG TTTTTGGCAT TGGAGAAAGC AAGATGGAGG ATTTAGTATG TGATCTTTTA 
GATAATGAAA ATCCAACAGT TGCTCCTTAT GCAAAAAATA TAGATGTTAT TTTAAGAATT 
ACTGCTAAGG GAAAAAATAA AGAAGAGGCA GAAAAGCTTA TTTCTCCTAT GGAAAAAGAG 
ATTAGAAAGA GACTTGGAGA TAATATCTAT GGTGAAGGGG AAGTAACTTT AGAAGAGGTT 
GTTGGAAAAT TATTAGTTGA TAAAAAAATG ACAGTATCAA CAGCTGAATC TTGTACTGGT 
GGCATGGTTG CAAGCACATT AATAAACTAT CCAGGAATAT CTGAGGTATT TATGGAAGGC 
GCTGTAACTT ATTCTAATGA AGCAAAAATG AAGAGACTTG GAGTAAAAAA AGAAACTTTA 
GAGGACTTTG GCGCAGTTAG TGAAGAGTGT GCTAGAGAGA TGGCAAAGGG TATTGCTAAA 
AATGCAGGAA CAAGAATAGG AATTTCTACA ACAGGTATAG CAGGTCCTGG CGGTGGAACA 
GAAGAAAAGC CAGTAGGTCT TGTTTATGCT GGATTATGTA TAGATGGAAT TACAAAGGTT 
AAAAAATTTA ATTTTAAAGC TGATAGACAA AAGGTTAGAA CTAGAACAAT GATGAATGTT 
TTAGATTGGT TAAGAAGAGA GCTTGAAAAA ATTGATTAA
 
Protein sequence
MKAEIMAIGT EILLGDIVNT NAQFLAKELA NLGIGVYHQS VVGDNSERIL EAFDNAFKNC 
DTIITTGGLG PTKDDLSKEL AAKYFNMEMC LREELLCDLE DYFKKNNLEM TENNKKQCYF 
PKEAIILPNP NGTAPGAILE GENNKRIILL PGPPREMEPM FTNHVVPYLS KFTDSVLVSK 
ILRVFGIGES KMEDLVCDLL DNENPTVAPY AKNIDVILRI TAKGKNKEEA EKLISPMEKE 
IRKRLGDNIY GEGEVTLEEV VGKLLVDKKM TVSTAESCTG GMVASTLINY PGISEVFMEG 
AVTYSNEAKM KRLGVKKETL EDFGAVSEEC AREMAKGIAK NAGTRIGIST TGIAGPGGGT 
EEKPVGLVYA GLCIDGITKV KKFNFKADRQ KVRTRTMMNV LDWLRRELEK ID