| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0124 |
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| Symbol | |
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| ID | 4201202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 149168 |
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| End bp | 150046 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638081005 |
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| Product | sortase family protein |
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| Protein accession | YP_694588 |
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| Protein GI | 110799718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.145453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGAGTA AGAGAAAATT AAAAAACAAA ATTTTTGATT ATATATTTTT ATTCATTGCA
GTTATAGGAA TTGCGTTAAT GCTTTACCCT TTTTATTCAG ATTATAAACT TGGAAAAAGT
CAAAAAATGC AAATCGAAAA GTATGAATCA AAAGTAAGTC AAATGTCTGA TGAGGAAAAG
AAGAAAATTT TAAAAACTTA TGAAGAACAA AATGGAAATA ATACTGAAGT TACTTCAGAA
GATCCATTTA ATAAATCTGA TAGTGTAAGT AGTATTGACT TAGTTAAAGT TCAATTACCA
GATGTAATTG CTATTCTTGA AATACCTAAG ATTAATTTAA AAGTACAAGT ATACCCTACT
ACTAACGAAA TGGTATTAAG AGAAGGAATT GGTGTTTTAG ATGGTACTTC ATTACCTACT
GGAGGAAATG GAAATCATTC TGTTTTGACT GGACATAGTG GATTGTCACT AGAAAATATG
TTTACAAATC TTCATGAGTT AGAGTTAGGA GATCATTTCT ATATTAATAT TTTGGGAGAA
GTACATGATT ATGAAGTTGA TAAAATACAA ACAGTTCTTC CAGATGATAC TTCTCATTTT
GACAAAGTAC CAGATAAGGA TTATATTACG CTGGTTACTT GTACACCTTT AGGGGTTAAT
AGTCATAGGT TATTAGTACG TGGGCATAGA GTTGATGATA GTCTAAGTAA TAATAAAAAT
ATTAATTCAA GTAAAATTCC TAACTTAGAT AAAAAGGATC ATTTTAGATT TGGATCAGTA
AAAACAATTA TAGTAACTAC AATAATTGTT TTACTATTTC TATTTGTTTT TTTGTTCATT
TTAAGAAGAA AAAAGGAAAA AAATAATATT GATAAGTAA
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| Protein sequence | MVSKRKLKNK IFDYIFLFIA VIGIALMLYP FYSDYKLGKS QKMQIEKYES KVSQMSDEEK
KKILKTYEEQ NGNNTEVTSE DPFNKSDSVS SIDLVKVQLP DVIAILEIPK INLKVQVYPT
TNEMVLREGI GVLDGTSLPT GGNGNHSVLT GHSGLSLENM FTNLHELELG DHFYINILGE
VHDYEVDKIQ TVLPDDTSHF DKVPDKDYIT LVTCTPLGVN SHRLLVRGHR VDDSLSNNKN
INSSKIPNLD KKDHFRFGSV KTIIVTTIIV LLFLFVFLFI LRRKKEKNNI DK
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