Gene CPF_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0101 
Symbol 
ID4202119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp121682 
End bp122422 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content27% 
IMG OID638080982 
Producthypothetical protein 
Protein accessionYP_694565 
Protein GI110800936 
COG category[S] Function unknown 
COG ID[COG5523] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000075579 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA AAGAGATAAA AAGTATTGCT AAATCTAAGT TAAAGGGAAG ATGGTTTAAT 
ATTGTCTTAT TAACTTTAAT CATAGCAATA ATTGAATTTG GAGCAAGTGA GATTATTGGA
AGAACTGAAG GAATAACTTC TAATATTTTA AACATAGCTA ATAACTTTTT ATTAATGCCA
GCTATAACGG CTTCAGGGAT TATATACACA ATTAAATTTG TTAAGAGTAA TGAAGTAGTA
GCTTTAAGTT ATGCTATTCC AAGTGTTAAA ACTTGGGGAA GATTTATAAT GAGTATGATA
GTTACTATGA TCTTTAGTAT TCCTATACTT TTAGTTGTGT TTTTAGGAAA TATATTTTTA
GTGTTATCTA TAACATCATT ACATAGTGCA ATGCTTAATG GCCAAATATC TATGAATCCT
ATGATAGGAA TTTGGGGAGT AATATTTTTA ATAGTTATAT TAGTATTAAT TTTAGCTGCT
GTAGTAGGAA TTTTATTATT CCCATTACCA TATTTAATGG CTGAAGATAC CTGTGGAATA
TGGGAAGCTG TTAAAAGAAG CTTTAAAATA ATGAATGGTC ATAAATGGGA ATTATTTATT
ATGGGACTTA GCTTCTTAGG ATGGTTAATA TTATCAGCAT TAACTCTTGG AATAGGATTA
TTATGGCTTC TACCATATAT CCAAGTTACC TTAAGAATAT ATTATCTTTC AATTACAGGA
AGAGAAAGTG AAATAAATTA A
 
Protein sequence
MNRKEIKSIA KSKLKGRWFN IVLLTLIIAI IEFGASEIIG RTEGITSNIL NIANNFLLMP 
AITASGIIYT IKFVKSNEVV ALSYAIPSVK TWGRFIMSMI VTMIFSIPIL LVVFLGNIFL
VLSITSLHSA MLNGQISMNP MIGIWGVIFL IVILVLILAA VVGILLFPLP YLMAEDTCGI
WEAVKRSFKI MNGHKWELFI MGLSFLGWLI LSALTLGIGL LWLLPYIQVT LRIYYLSITG
RESEIN