Gene CPF_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0099 
Symbol 
ID4202386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp119740 
End bp120915 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content23% 
IMG OID638080980 
Producthypothetical protein 
Protein accessionYP_694563 
Protein GI110799194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0965703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAAAA TAAAAAAAAA TATCAATAAA GATGCCGAAA AAAAATATGA ATATAGATTT 
TATAGGTACT TGGGCTTAGT TTTAATTATT CTTTTTTCCT GTATAGTTAC TGTAAGTAAT
TTAATAAATC CAGGAGAAAC GAAGAAATTA ATTTCAGAGC TAGTTAGAAA GGGCTATAGT
GATTTTTTTC AGTATGAATT ACAAAATAGT GATAAATCAC TTCAAGAGAT ATATGATTCA
TATTCAAAGA ATGAAAATAT AGAAGTTTAT AAGCTCATGG CCTTAAATAC TATATATTTT
GGTGGAGATA GAAATAGGTA TTTAGAGCCC TATATAAGAC CCTACATAGA TAAGTATAAT
TTATCACAAA ATGATAGATT GAAATTATAT GAAGATGTAA ATAAAGAAAT AAAAAATATT
GAAAATAAGT ATATCTTTAA GTTAATTGTT AAGAGATTTT CACCATACAT ACTTGCTATT
GCTTTTGTAA CTTTAATAAT GGGAAGTGCT TCATTTATTA GAAAGAGAAA TAATGTTGAA
AGAATTATAA TTAATATTTT AATATTTTTA GCTGGAATAT ATATATGCTA TTTATCTAGT
ATAAGTGTGA AGCATGGAAT ATGGATTAAT TTAGCTATTA TGCTGGCTCT AGCAGAGTTT
ATTATAGAAA ATAAAACTAA GTTATTAGAA TATATTGGAG GATCTATTAT ACTAATTATT
TTAGTTTTAA GTATATTAGG TAAATTTGAG TATAAATCAA ATGAATTAGA TAAATATGAT
GTAAATAAAT TAGTTTTAGT AAATAATTTT CAAGGAGCTA ATTTTGCTAA TGAAGAGCAC
GATATTCAAA GAAGTGGACG AGCTTTATAT TCTGAAATCA AAAAAGAGAA TATGATATTA
ATAGATAATT CTAATGAAAA TATAAATAAT TTAATTGAAA ATAAAGAGAA AATCATATTT
AATAATAAAG AAAATAATAA ACCTGTATTT TATATGTGTT TATATAATAA TATTCCAGTA
TATAGATTAG CCTTAGTTAA GGAGGGCCAA ATAGTAAAGA TATATGAGGG AGTATTAAAT
CCTTATATGA GAAGTACACT TATGAAGTTA GAAAGAGGAA AAGGGCATAA GAAAAACAAA
GTATGCAATA TAGAGATGCT TAAAACAATA AATTAA
 
Protein sequence
MIKIKKNINK DAEKKYEYRF YRYLGLVLII LFSCIVTVSN LINPGETKKL ISELVRKGYS 
DFFQYELQNS DKSLQEIYDS YSKNENIEVY KLMALNTIYF GGDRNRYLEP YIRPYIDKYN
LSQNDRLKLY EDVNKEIKNI ENKYIFKLIV KRFSPYILAI AFVTLIMGSA SFIRKRNNVE
RIIINILIFL AGIYICYLSS ISVKHGIWIN LAIMLALAEF IIENKTKLLE YIGGSIILII
LVLSILGKFE YKSNELDKYD VNKLVLVNNF QGANFANEEH DIQRSGRALY SEIKKENMIL
IDNSNENINN LIENKEKIIF NNKENNKPVF YMCLYNNIPV YRLALVKEGQ IVKIYEGVLN
PYMRSTLMKL ERGKGHKKNK VCNIEMLKTI N