| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0098 |
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| Symbol | ldh |
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| ID | 4201996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 118161 |
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| End bp | 119114 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638080979 |
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| Product | L-lactate dehydrogenase |
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| Protein accession | YP_694562 |
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| Protein GI | 110800638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.409551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGAG AAAAAACTAA TAAAATCTCA ATAATAGGTG CAGGATTCGT TGGTTCAACA
ACAGCCTTCG CATTAATGCA AGATGGATTA GCATCCGAAA TAGTAATTGT TGATATAAAT
AAGGATAAGG CACATGCTGA AGCTATGGAC CTAGCACAAG GTGCGGCATT TGTTAAATCT
GTTGATATAA AATCAGGAGA CTATGCAGAT ACAAAAGACT CTGACATAGT TATAATAACT
GCTGGAGTTG GTCCAAAGCC AGGCGAAACA AGATTAGATA TTATAAATAA AAACTTAAAG
ATCTTCCAAA GTATAGTACC TGAGGTTGTT AAATATAGCC CAAACTCAAT ACTTTTAGTA
GTATCAAACC CAGTTGATAT TTTAACTTAT ATAACTTACA AGCTTTCTGG ATTCCCTAAA
GAACGTGTTA TTGGATCTGG AACTGTCTTA GATACTTCAA GATTAAAATA TATGCTTTCA
GAACATTTTG ATATAGACGC TAGAAATGTT CACACATATA TAATTGGAGA ACATGGAGAC
TCAGAAATAA CAGCTTGGAG CTTAACTAAT ATCGCTGGAG CAAATGTTGA AGAATATTGT
AAAACAGTTT GCGCTAACTG CGATGGCTCC TTTAAAAAGG AACTTCCTGA AAAAGTTAAA
AATGCAGCTT ATGAAATAAT AAATAGTAAA GGATATACAA ACTATGCTGT AGCTCTTGCC
GTTACAAGAA TAGTTGAAGC AATCCTTCGT GATGAAAATG CTATTTTAAC TGTTTCTTCT
CTATTTGAAG GCCAATACGG AATTGATAAT GTTTATTTAG CAATGCCTAC TATAGTTGAT
AGAAGTGGAG CTAGACAAAT TCTAGATGTC CCTATATCAA ATGAAGAAAA AGAAAACCTA
ATAAAATCAG CCGAAATTTT AAAAGGTCAT ATAGCTAATT CTGAATTAGA TTAG
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| Protein sequence | MIREKTNKIS IIGAGFVGST TAFALMQDGL ASEIVIVDIN KDKAHAEAMD LAQGAAFVKS
VDIKSGDYAD TKDSDIVIIT AGVGPKPGET RLDIINKNLK IFQSIVPEVV KYSPNSILLV
VSNPVDILTY ITYKLSGFPK ERVIGSGTVL DTSRLKYMLS EHFDIDARNV HTYIIGEHGD
SEITAWSLTN IAGANVEEYC KTVCANCDGS FKKELPEKVK NAAYEIINSK GYTNYAVALA
VTRIVEAILR DENAILTVSS LFEGQYGIDN VYLAMPTIVD RSGARQILDV PISNEEKENL
IKSAEILKGH IANSELD
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