Gene CPF_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0094 
SymbolgldA 
ID4203269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp112515 
End bp113645 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content34% 
IMG OID638080975 
Productglycerol dehydrogenase 
Protein accessionYP_694558 
Protein GI110799394 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGG CTTTTATATG CCCAACAAAA TATGTTCAAG GAGAAAATGA ATTACTTAAT 
TTAGGTTACT TTGTAGAGAC TTACGGAAAG TCAGCACTTT TAATAGCTCA TCCAGAAGAT
ATAAAGAGAG TTAAAGATAA ATTAGATGCA ACAGCAAAGA AATTTAACAT TGAATTTGTA
GAAGGCGGAT TTAAAGGTGA ATGTTCACGT CAAGAAGTTA AAAGACTTCA AGATCTTGCA
AAGGAAATGA AATGTGATTG TACAGTAGGT CTTGGTGGAG GAAAAGCTTT AGACACAGCT
AAATGTGTTG CTGAAGGTGA AAAACTTATA GTAGTACCAA CAATAGCAGC TACAGATGCT
CCAACTAGTC ACTCAGCAGT TTTATATACA GAAGATGGAT CATTTGATGA TTATGCATAC
TTTAAAGCAA GCCCAAGTGT TGTTTTAGTA GACACAGAGG TAATAGCAAA AGCTCCAACT
CGTTTCTTAG TAGCAGGTAT GGGAGATGCT TTATCAACTT ACTTTGAAGC AAGAGCAACA
TCAAGTTCAT TTACTAAAGT CAATGCGGGA TTACCATGTG GGGTAAGAGA AGAAAAATGT
AGACCAGCAA TTGGAACAAA TGCTTCATTA GCACTTGCTA AGCTTTGCTA TGAAACATTA
TTAGAAGACG GAAAGAAAGC TAAAGATGCT TGTGATTGTA ACTGTGTTAC TAAATCTTTA
GAAAATATAG TAGAAACAAA CATATTATTA TCAGGTTTAG GATTTGAGAG TGGTGGATTA
GCTGCAGCTC ATGCTATACA TGATGGTTTA ACAATATTAG AAGGAACACA TGGATATTTC
CATGGAGAAA AGGTTGCTTT TGGAACAATA GCTCAATTAG TTCTTGAAAA TGCACCAAAA
GAAGAATTAT ATGAAGTTTT AGATTTCTGT TTAGAAATAG GTCTTCCAGT ATGTCTTGAA
GATATAGGTG TAACAGAAGT TTCAGATGAA GAATTATTTG AAGTTGCAGA AAAAGCTTGT
ATACCAGAAG AGTCAATTTA CTCAATGCCA TTTGGAATAG AAGTTTCAGA AGTAGTATCA
GCAATTAAAT TAGCAGATAA GATAGGTAAA GACTACAAAA ATAGAAAATA A
 
Protein sequence
MRKAFICPTK YVQGENELLN LGYFVETYGK SALLIAHPED IKRVKDKLDA TAKKFNIEFV 
EGGFKGECSR QEVKRLQDLA KEMKCDCTVG LGGGKALDTA KCVAEGEKLI VVPTIAATDA
PTSHSAVLYT EDGSFDDYAY FKASPSVVLV DTEVIAKAPT RFLVAGMGDA LSTYFEARAT
SSSFTKVNAG LPCGVREEKC RPAIGTNASL ALAKLCYETL LEDGKKAKDA CDCNCVTKSL
ENIVETNILL SGLGFESGGL AAAHAIHDGL TILEGTHGYF HGEKVAFGTI AQLVLENAPK
EELYEVLDFC LEIGLPVCLE DIGVTEVSDE ELFEVAEKAC IPEESIYSMP FGIEVSEVVS
AIKLADKIGK DYKNRK