| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0087 |
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| Symbol | |
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| ID | 4203562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 103419 |
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| End bp | 105008 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638080968 |
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| Product | putative symporter YidK |
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| Protein accession | YP_694551 |
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| Protein GI | 110800165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATAT TTTTGAGTTT TGCAATATTC TTAGTAGCTG TATTCGCTAT TGCTTGGTAT
AAAGCTAAAG GCACTGATAA TACAGAAACA GCAACAGGAT ATTTCTTAGC AGGAAGAGGA
TTAAGCGGTC CTGTAATCGC TGCAACAATG ATACTTACAA ATCTTTCAAC TGAACAGATC
ATAGGTCTTA ATGGTCAAAG TTATGCTACC AATATGGGAC CAATGGCATG GGAAGTTACA
TCATGCGTAG CACTTATAAC ACTAGCTCTT ATATTCTTAC CAAGATATTT AAAAGGTGGA
ATCACAACAA TCCCAGATTA TTTAGAAGAG AGATTTGATA GCACAACTAA AAGAATAGTT
TCAATTTTAT TCTTAGTTAG TTATGTTGTA ACTTACATAC CTACAGTTTT ATATTCAGGT
GGACTAGTTT TAAATCAGAT TTTTGGTATA TCAGATTTAT TAGGAATAAG TACATTCCAA
GCTGTAGCAT TAACTGGATT TTTATTAGGG GTAGTAGGTG CTATATATAC AGTTCTTGGA
GGTATGAAAC TAGCAGCATT CTCTGATACT GTAAATGGAA TTGGCTTATT AATCGGAGGT
CTTTTAGTAC CTATATTAGG AATATTATTA CTTGGAAATG GAGATTTTGT TGGAGGATTT
GAAATAATAA TTGCAACTCC AGAAAAGCTT AATGCTATTA ACCCAGCAAA TGCACAATCA
CCATTAATTC CATGGCCTGT ATTATTCACT GGATTATTAT TTAATAACTT ATTCTATTGG
TGTACAAACC AATCAATAGT ACAAAAAGCA TTAGGAGCTA GTAGTTTAAA AGAAGCTCAA
AAAGGTGCTA TACTTGCAGG ATTAATTAAG GTTTTAACTC CAGCAATACT TGTATTCCCT
GGAATCATAG CTTTTGCTAA ATATGGAGAT GCATTACCAA ATGCGGATAT GGCATATCCA
ACATTATTGC TTGATGTATT ACCAAAACCT TTATTAGGAA TATTTGCAGC AATTTTATTT
GGAGCTGCCA TGAGTTCATT AAATGGTGCT ATGAACAGTT CATCAACACT ATTTACTTTA
GATTTATACA AACCTATCAT AAATCCAGAG GCTTCAGATA AACAACTTGT AAAAGTAGGA
CAAAAATTTA TTATAGTGGT ATCAGTTATA TCAGTTATAG TTGCTCCATT TATCCTATAT
GCTCCATCTG GATTATATAA CTTCTTACAA GAGTGTAATG GATACTTTAA CGTTCCGATA
TTAGCGTGTG TAATAGTTGG ATTCTTTACA AAGAGAGTTC CAAGTCTTGC TGCTAAAGCA
GTATTCGTAG TGCACATTGT TTTGTATACG TTATCAAAAT TCTTCTTATC AGATATACAC
TTCTTATACG TACTAGGTGT GTTACTACCA ATAGGTGTAA TTGTAATGCT TATAATAGGT
AAGATAAAAC CAAGAGAAAC AGATTTTGTT CAAGCTGATA AGGCATTAAT AGATATGACT
CCTTGGAAAT ATGCAAAACC AGCATCATTA GCTGTAGTTC TTGTTATGGC ATTTATATAT
CTATTATTCT CACCTATAGG ATTAGCTTAA
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| Protein sequence | MFIFLSFAIF LVAVFAIAWY KAKGTDNTET ATGYFLAGRG LSGPVIAATM ILTNLSTEQI
IGLNGQSYAT NMGPMAWEVT SCVALITLAL IFLPRYLKGG ITTIPDYLEE RFDSTTKRIV
SILFLVSYVV TYIPTVLYSG GLVLNQIFGI SDLLGISTFQ AVALTGFLLG VVGAIYTVLG
GMKLAAFSDT VNGIGLLIGG LLVPILGILL LGNGDFVGGF EIIIATPEKL NAINPANAQS
PLIPWPVLFT GLLFNNLFYW CTNQSIVQKA LGASSLKEAQ KGAILAGLIK VLTPAILVFP
GIIAFAKYGD ALPNADMAYP TLLLDVLPKP LLGIFAAILF GAAMSSLNGA MNSSSTLFTL
DLYKPIINPE ASDKQLVKVG QKFIIVVSVI SVIVAPFILY APSGLYNFLQ ECNGYFNVPI
LACVIVGFFT KRVPSLAAKA VFVVHIVLYT LSKFFLSDIH FLYVLGVLLP IGVIVMLIIG
KIKPRETDFV QADKALIDMT PWKYAKPASL AVVLVMAFIY LLFSPIGLA
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