Gene CPF_0084 details

Gene Information

• Locus tag: CPF_0084
• Symbol: iolD
• ID: 4201952
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 99329
• End bp: 101248
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638080965
• Product: myo-inositol catabolism protein IolD
• Protein accession: YP_694548
• Protein GI: 110801040
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3962] Acetolactate synthase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATGA CTACAGGCCA AGCGCTAGTA AAATTTTTAG ATAATCAATA CGTTTCTTTT 
GATGGTAAAG AAGAAAAATT TGTTGATGGG ATATTCACTA TATTTGGACA TGGTATTGTA 
GTTGGATTGG GAGAAGCTTT ATATGAAAAT CCAGGTGAAC TTAAAGTTTA TCAAGGAAGA 
AATGAGCAAG GTATGGCTCA TGTTTCAACA GCTTTCGCAA AACAAAACAA TCGTAGAAAA 
ATAATAGCTT GTTCAAGTTC AGTTGGCCCT GGAGCTGCTA ATATGGTTAC TGCAGCAGCT 
ACAGCAACAG TGAATAATAT ACCATTATTA TTATTACCAG GAGATTCATT TGCTACAAGA 
CAACCAGATC CTGTACTTCA ACAGATAGAA CAGTCCTATA ATTTAGGAAT AACAACAAAT 
GACGCATTTA AGCCAGTTTG TAAGTATTGG GATAGAATAA ATAGACCAGA GCAACTTATG 
TCAGCAATGA TAAATGCTAT GAGAGTATTA ACAGATCCTG CTGAAACAGG TGCTGTTTGT 
ATAGCATTAC CACAAGATGT TCAAGGAGAA GCTTATGACT TCCCAGAATA TTTCTTTAAG 
AAAAGGGTTC ATAGGATAAC TAGACCTCTA GCTGTACAAG AAGAGTTTGA AGAGGCATTA 
GATATAATAA TGAATAAAAA GAAACCTATA ATAATTTGTG GTGGTGGAGT TAGATACTCA 
GAAGCAGGGG AAGCTTTAGT TGATTTTGCA GAGGAGTTTA ATATTCCAAT ATGCGAAACA 
CAAGCAGGTA AGAGTGCTAT TAAATCAAGT CACCCATTAA ATTTAGGTGG TATAGGGGTT 
ACTGGTAACC TTGCTGCAAA TATGATTGCT AAAGATGCTG ATTTAGTAAT TGGTGTTGGA 
ACAAGATTCT CAGACTTCAC AACTTCATCA AAATCATTAT TTAAGAATCC AGAAGTTGAT 
TTTATAACTG TAAACGTATC AAAATTCCAT GGTGAAAAAA TGGATGCTCA CAAGATAATA 
GGTGATGCAA AGGTATGTAT AGAAGAATTA CAAGCTATGT TAGAAGCAAA TAACTATGAA 
TCATCTTATG AAGATGAAAT AGTAAATGCT AAAAAAGCTT GGAAAGAAGA GATGAAGAGA 
TTAACAAATA TTAAATATGA TGAAAACTTT GAAGCTTTAA TAAAACCTAA GAGAGAAGGA 
TGCATAGAAG AGTTTAGTGT ATTAACAGGA GGTTTAATCA CTCAAACAGC TGCTTTAGGA 
GTTATTAGAG AAACAATAGA TGATGATGCC ATAGTAGTTG GAGCTGCTGG AAGTTTACCA 
GGAGATCTTC AAAGAATGTG GGAAACAGAT GTTAGAGATT CATACCACAT GGAATATGGA 
TATTCATGTA TGGGATATGA AATAGCAGCT ACATTAGGAG CTAAGTTAGC AGAGCCAGAA 
AGAGAAGTTT ACTCAATGGT TGGTGATGGA AGTTACTTAA TGCTTCATTC AGAGATGGTA 
ACAGCTATGC AAGAGCAAAA GAAGATAAAT ATACTTTTAT TTGATAACTG TGGATTTGGA 
TGTATAAACA ATCTACAAAT GTCAAATGGT ATAGGAAGCC TTGCTACAGA GTTTAGATAT 
AGAGATGAAA ATGGTAAGTT AGAAGGGGGA TTAATCCCTA TAGATTTTGC TAAGGTAGCT 
AGTGGGTATG GATTGAAAAC ATATTCAGTA AAAACTTTAG CTCAATTAAA AGAAGCTTTA 
GAAGATGCTA AAAAGCAAAA GGTTTCAACT TTAATAGACA TAAAGGTGTT ACCAAAAACA 
ATGACAGATG GCTATGATGC ATGGTGGCAT GTTGGAATAG CTGGAGAATC AAAAATTGAT 
GGTGTAAATA AGGCGTTTGA GAACAAAGAG AAAAATTTAA AAGCCGCTAG AAGATATTAA 

 

Protein sequence

MRMTTGQALV KFLDNQYVSF DGKEEKFVDG IFTIFGHGIV VGLGEALYEN PGELKVYQGR 
NEQGMAHVST AFAKQNNRRK IIACSSSVGP GAANMVTAAA TATVNNIPLL LLPGDSFATR 
QPDPVLQQIE QSYNLGITTN DAFKPVCKYW DRINRPEQLM SAMINAMRVL TDPAETGAVC 
IALPQDVQGE AYDFPEYFFK KRVHRITRPL AVQEEFEEAL DIIMNKKKPI IICGGGVRYS 
EAGEALVDFA EEFNIPICET QAGKSAIKSS HPLNLGGIGV TGNLAANMIA KDADLVIGVG 
TRFSDFTTSS KSLFKNPEVD FITVNVSKFH GEKMDAHKII GDAKVCIEEL QAMLEANNYE 
SSYEDEIVNA KKAWKEEMKR LTNIKYDENF EALIKPKREG CIEEFSVLTG GLITQTAALG 
VIRETIDDDA IVVGAAGSLP GDLQRMWETD VRDSYHMEYG YSCMGYEIAA TLGAKLAEPE 
REVYSMVGDG SYLMLHSEMV TAMQEQKKIN ILLFDNCGFG CINNLQMSNG IGSLATEFRY 
RDENGKLEGG LIPIDFAKVA SGYGLKTYSV KTLAQLKEAL EDAKKQKVST LIDIKVLPKT 
MTDGYDAWWH VGIAGESKID GVNKAFENKE KNLKAARRY