Gene CPF_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0078 
Symbol 
ID4201824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp93261 
End bp93884 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content27% 
IMG OID638080959 
Productphosphoglycerate mutase family protein 
Protein accessionYP_694542 
Protein GI110800392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.570626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT ATTTCACAAG ACATGGGGAA ACTTTATGGA ATCTTGAGCA TAGATTTCAA 
GGATGGAAGG ATTCTGAGTT AACTGAAAAT GGAGTTAAAA GAGCAGAGTT ATTAGGAAAG
AAATTTAATG ATATTAAAAT AGATAAGATT TTTACAAGTC CTATAAAAAG AGCAAAGAGA
ACTGCATACT TAATAAAAGG TGATAAGGAT ATTGAGGTTG AAGAAGTTGA AGGATTAAAA
GAAATAAGTT TTGGAAAGTG GGAAGGAATG ACCACTGAAG AGATAAAAAG TCATGATGAA
TACGTAAATG AATTAGATAA TCTATTCAAT AAACCATTTT CTTATAAGAG TTTTGAAGGA
GAAAATATAA AAGATTTTAC AGAAAGACTA TTTAAAACTG TAGATGATAT AGTAAAAAAT
AATGAAGATA AGGACATTTT AATAGTTACT CATGGAATGT GTGTAAGATA TTTAATAGGA
TACTTTAAAA ATGAATTTGA GGAAAGCAAA ATAATAGATT ATCCTATATT TCATCAAGCT
AGTTATAATG AGGTTGAATG GAATGGAGAA AATTTTGAAG TAATTACTTT GAACAATATT
GACCATTATG AATATGATAA ATAA
 
Protein sequence
MKIYFTRHGE TLWNLEHRFQ GWKDSELTEN GVKRAELLGK KFNDIKIDKI FTSPIKRAKR 
TAYLIKGDKD IEVEEVEGLK EISFGKWEGM TTEEIKSHDE YVNELDNLFN KPFSYKSFEG
ENIKDFTERL FKTVDDIVKN NEDKDILIVT HGMCVRYLIG YFKNEFEESK IIDYPIFHQA
SYNEVEWNGE NFEVITLNNI DHYEYDK