Gene CPF_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0069 
Symbol 
ID4203846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp77726 
End bp78574 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content27% 
IMG OID638080947 
Producttranscription antiterminator 
Protein accessionYP_694534 
Protein GI110800004 
COG category[K] Transcription 
COG ID[COG3711] Transcriptional antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA AAACGGAAAA AGCATATGAG GTAAAAAGAG CCTTCAACAA TAATATAGTT 
TTGGTTGATG ATGATGAAAA AGAAATTATA TTATTTGCTA AAGGTATAGG CTTTAATTGT
AAAAAAGGTT CAATAATACC TGAGAATACT AATATAGAAA AAATATTTAC TATACAAGAT
GAGAATAATA TTGCTAACTT TAGAAGAGTG GTTGGAAGTA ATGATGAGAA GTTTATTGCT
TTTTGTGAAG AATTAATATT AGAGATTTCA AGAGATTTTA GTGAGGAATT AAACGAGATT
ATACATATAG GTTTAATAGA TCATATTTCT TTTGCTATTG AGAGAATGAA AAAAGGAGAG
ATTTTAAGAA ATCCTTTTTT AGTAGAAATA GAAACTCTAT ATCCTAAAGA GTTTGAGGCT
GCAACTAAAA TGGTTAAAAA GCTTGAGGAT TTTACAGGGG TAAGTATAGT TGATGATGAG
ATTGGATTTA TTGCTATGCA TATACATTCG GCAAGAACAA CAGGAAAGAT TTCTCATACA
ATAAAATTTA CCTATATAGC AAATACTGCT GTAGAATATA TTGAAGATGC TTTTAATATT
GAAGTAGATA GAACTTCATT ATCTTATGCT AGATTTATAA GTCACTTAAG ATTTGCTATT
GAAAGACTTA TAAATAATAC TCCGGTAAAA AATGAATTAC TTTCTATTAT AAAACTAAAG
TATCCAGAAT CCTTTAAGGT TGCTGAAGAA ATAGGAAAAG CTATAAATGA AGATTTTTCT
CTAGAAGTTG CAGAAGATGA GATAGGGTAT TTAGCCTTGC ATGTAGAGAG AATAAGAAAA
AATGAATAA
 
Protein sequence
MIKKTEKAYE VKRAFNNNIV LVDDDEKEII LFAKGIGFNC KKGSIIPENT NIEKIFTIQD 
ENNIANFRRV VGSNDEKFIA FCEELILEIS RDFSEELNEI IHIGLIDHIS FAIERMKKGE
ILRNPFLVEI ETLYPKEFEA ATKMVKKLED FTGVSIVDDE IGFIAMHIHS ARTTGKISHT
IKFTYIANTA VEYIEDAFNI EVDRTSLSYA RFISHLRFAI ERLINNTPVK NELLSIIKLK
YPESFKVAEE IGKAINEDFS LEVAEDEIGY LALHVERIRK NE