Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0060 |
Symbol | |
ID | 4200973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 63533 |
End bp | 64609 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638080935 |
Product | aminotransferase, class V |
Protein accession | YP_694526 |
Protein GI | 110799142 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.138135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAAA AGCTATTTAT ACCAGGACCT GTGGAGGTGA GAGAGGAAGT ATTAGAAAAA ATGGCTACTC CTATGATTGG GCATAGAAGT AAAGAGGCAT CTCAATTACA AAGAAGAATA AGCGATAATT TAAGGAAATT ATTTTTTACT AATAATGAAA TACTTTTATC AACAACTTCA GGAAGTGGAT TAATGGAGGG AGCTATAAGA AGTTGTACTT TAAAGAAGGC TGCTGTATTT TCTGTGGGGG CTTTTGGGGA TAGATGGTAT GAAATGGGGA TAAGTAATAA TGTTCCTGTG GATAAATTTG AAGTTCCTTG GGGAAAAAGT ATTAATGTAG ATTTAATTGA TTCAGTTCTT AAAACTGGAC AGTATGATTT AATAACAGTA ACTCATAATG AAACATCTAC AGGGGTTATG AATGATTTAG AAGCAATAAG CAAAGTTATA AGGAAATATC CAGAGGTTAT ATTCTGTGTT GATGCAGTTA GTTCTGCAGG TGGAAGTAAA ATAGAGGTGG ATAAACTTAA TATAGATATA TGTATTACTT CTTCACAAAA AGCTTTAGGG CTTCCTCCAG GAATAGCAAT ATGTACATTT TCAGAAAGAG CTAGGGAAAG AGCAGAAAAA GTTAAGTTTA GAGGAACGTA TTTAGATTTA TTAGCTTTAT ATAAATATAT TAAAAAGAAG GATTATCAAT ATCCATCAAC TCCTTCTATT TCACATATGT ATGCTTTAGA TTACCAATTA GATTATATAT TAAATGTAGA AGGGCTAGAA AATAGATTCA ATAGACATAT TGAAATGGCT AAAATAGTTA GAGAATGGGC AGAAAAATAT TTTGAAATTT ATCCTGAAAA GGAGTACTAT TCAAATACTC TTACAACTAT AAAAAATAAT AAAAATATAG ATATTGGGGC TTTAAATAAG GAACTTGGGA AAAGAGGATT TCAAATATCT AATGGGTATG GAAAGCTAAA GGATAAGACA TTTAGAATAG CACACATGGC TGACTGCCAA GTTAAAGATA TAAAAGAATT ATTAAGCAAT ATAAATGAAA TTTTAGAATT GGAATAA
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Protein sequence | MHKKLFIPGP VEVREEVLEK MATPMIGHRS KEASQLQRRI SDNLRKLFFT NNEILLSTTS GSGLMEGAIR SCTLKKAAVF SVGAFGDRWY EMGISNNVPV DKFEVPWGKS INVDLIDSVL KTGQYDLITV THNETSTGVM NDLEAISKVI RKYPEVIFCV DAVSSAGGSK IEVDKLNIDI CITSSQKALG LPPGIAICTF SERARERAEK VKFRGTYLDL LALYKYIKKK DYQYPSTPSI SHMYALDYQL DYILNVEGLE NRFNRHIEMA KIVREWAEKY FEIYPEKEYY SNTLTTIKNN KNIDIGALNK ELGKRGFQIS NGYGKLKDKT FRIAHMADCQ VKDIKELLSN INEILELE
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